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Domain assignment for ENSCPOP00000020182 from Cavia porcellus 76_3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSCPOP00000020182
Domain Number 1 Region: 971-1109
Classification Level Classification E-value
Superfamily C2 domain (Calcium/lipid-binding domain, CaLB) 8.51e-22
Family Synaptotagmin-like (S variant) 0.069
Further Details:      
 
Domain Number 2 Region: 424-518
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 4.21e-21
Family Canonical RBD 0.00000276
Further Details:      
 
Domain Number 3 Region: 547-631,770-848
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 1.37e-20
Family Canonical RBD 0.0000147
Further Details:      
 
Domain Number 4 Region: 1127-1330
Classification Level Classification E-value
Superfamily vWA-like 2.97e-20
Family Integrin A (or I) domain 0.023
Further Details:      
 
Domain Number 5 Region: 858-976
Classification Level Classification E-value
Superfamily C2 domain (Calcium/lipid-binding domain, CaLB) 3.11e-17
Family PLC-like (P variant) 0.032
Further Details:      
 
Domain Number 6 Region: 296-385
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.00000000000000102
Family Canonical RBD 0.0035
Further Details:      
 
Domain Number 7 Region: 4-87
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.000000057
Family Canonical RBD 0.0065
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000020182   Gene: ENSCPOG00000022553   Transcript: ENSCPOT00000026555
Sequence length 1383
Comment pep:known_by_projection scaffold:cavPor3:scaffold_45:2364938:2408958:-1 gene:ENSCPOG00000022553 transcript:ENSCPOT00000026555 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGELGEAFIVFATDEDARLGMMRT
GGTIKGSKVTLLLSSKTEMQNMIELSRRRFETANLDIPPANANRSGPPPSSGMSGRVNLP
TTVSNFNNPSPSVVTTTTSVHESNKNVQTFSASNVGTAPPNMGTSFGSPTFSSTIPSTAS
SMNTVPPPPIPPIPAMPSLPPMPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLPP
MSGMPPLNPPPVAPLPAGMNGSGAPINLNNNLNPMFLGPLNPVNPVQMNSQSSVKPLPIN
PDDLYVSVHGMPFSAVENDVRDFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEAL
KRNRMLMIQRYVEVGPATERQWVAAGGHITFKQSIGPSGQTHPPPQTLPRSKSPSGQKRS
RSRSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRN
EADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDTIRKRLQNFSYDQREMILNPEGDVN
SAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARK
SEHLHRKKLNGREAFVHVVTLEDMREIEKNPPVQGKKGLKMPVPGNPAVGEEHAFLTVGS
KEANNGPPFNFPGNFGGSNAFGPPLPPPGLGGAFGDVRPGMPSVNNSGLPGLGLEVPGFG
GGPNNLSGPSGFAGGPQNFGNGPATLGHLSGPPAIHIGGPPGFGSSSGKPGPTVIKVQNM
PFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIG
SRKVKLMAHCKTLVQLSISCDHLIDKDISSKSDPLCVLLQDVGGGSWVEFGRTEQVRNCS
SPEFSKTLQLEYHFETVQKLRFGIYDIDNKTPELADDDFLGGAECSLGQVVSSQILTLPL
MLKPGKPAGRGTITVSALELKDSCVVTMEVEARNLDKKDFLGKSDPFLEFFRQGDGKWHL
VYRSEVIKNNLNPTWKRFSVPLQQLCGGDYSTPIQVRCSDYDNDGSHDLIGIFYTSLTQL
QAVPAEFECIHPEKHQKKKSYKNSGTVCVKVCQVETEYSFLDYVMGGCQINFTVGVDFTG
SNGDPSSPDSLHYLSPTGVNEYLTALWSVGSVIQDYDSDKLFPAFGFGAQVPPDWQVSHE
FALNFNPNNPYCPGIQGIVDAYRQALPQIRLYGPTNFAPIINHVARFAAQAAYQRTASQY
FVLLLLTDGAVTDVEATCQAVVNASKLPMSVIIVGVGGADFEAMERLDADGGPLRTHSGE
SAARDIVQFVSYRRFQNAPREALAQAVLAEVPTQLVSYFKAQGWTPLKMPPSPAKVPAQA
PQA
Download sequence
Identical sequences ENSCPOP00000020182 10141.ENSCPOP00000020182 ENSCPOP00000020182

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