SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSCPOP00000003358 from Cavia porcellus 76_3

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSCPOP00000003358
Domain Number 1 Region: 2421-2574
Classification Level Classification E-value
Superfamily SET domain 7.06e-47
Family Histone lysine methyltransferases 0.0064
Further Details:      
 
Domain Number 2 Region: 1194-1265
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.0000000138
Family PHD domain 0.013
Further Details:      
 
Weak hits

Sequence:  ENSCPOP00000003358
Domain Number - Region: 1305-1371
Classification Level Classification E-value
Superfamily Bromodomain 0.000106
Family Bromodomain 0.0062
Further Details:      
 
Domain Number - Region: 1057-1107
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.000176
Family PHD domain 0.015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000003358   Gene: ENSCPOG00000003718   Transcript: ENSCPOT00000003762
Sequence length 2574
Comment pep:known_by_projection scaffold:cavPor3:scaffold_52:10074419:10096372:1 gene:ENSCPOG00000003718 transcript:ENSCPOT00000003762 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
CPVAAPGGACPRTVHFPGRSVLRILDGRAKRGAAGPGLERRVRVALRRGSGAAGPGGAEP
GEDTALLRLLGLRRGLRRLRRLWAGPRLQRMPEEESSDGESDDEEFQGFHSDEDVAPSSL
RSALRSQRGRAPRGRGRKHKTTPLPPRLADVASAPPKTPARKRGEEGTERMVQALTELLR
RAQRSRACEPSTPRRSRGRPPGRPAGPSRKKQQAVVVAEAAVTIPKPEPPPPVVPVKHRT
GSWKCKEGPGPGPGTPKRGGQSGRGGRGGRGRGRGGLPLVIKFVSKAKKVKMGQLSLGLE
SGQGQPGESWQDDPQRKIGSGQGGSPCWKKLTLAKEKEEAEEQQEESPPPAVPVTSSRKR
GRPPLTPSQRAEREAARAGPEGTSPPTPNPSTTTGGPLEDSPTVAPKSTTFLKNIRQFIM
PVVSARSSRVIKTPRRFMDEDPPKPPKVEVSPILRPSVATSPLIPQEPALAPSPPRAPTP
PSTPVPLPEKRRSILREPTFRWTSLTRELLLRAAQFTPSEAHLKIYESVLTTPPLGAPEA
PEPEPPPADDSPAEPEPRAVGRTNHLSLPRFAPVVTTPVKVEVPHGGPPALSNGQQPQAQ
VQQPLQTLQTQRLPQALPPQAPPHISPLEKARIAGLSSLPMSGVEEKMFSLLKRAKVQLF
KIDQQQQQKVAASMPPSPGGQLEEAVGTVKQTLDRGCVRSEDESVDTKRERASGPESPVQ
GPRIKHVCRHAAVALGQARAMVPEDVPRLSALPLRDRQDLTTEDTSSASETESVPSQSQR
GKVESAGPGGDLESAGSAGILAHTPRRSLPSHHGKKMRMARCGHCRGCLRVQDCGSCVNC
LDKPKFGGPNTKKQCCVYRKCDKIEARKMERLAKKGRTIVKTLLPWDSDESPEASPGPPG
PRRGVGAGGPREEVTATTGPEEQDSLLLQRKSARRCVKQRPSYDIFEDSDDSDPGGPPAP
RRRTPRENELPVPEPEEQSRPRKPTLQPVLQLKARKRLDKDALGPGPFASFPNGWTGKQK
SPDGVHRVRVDFKEDCDLENVWLMGGLSVLTSVPGGPPMVCLLCASKGLHELVFCQVCCD
PFHPFCLEEAERPLPQHHDTWCCRRCKFCHVCGRKGRGSKHLLECERCCHLFSSSSPCLA
LPLYYSTSNIFLLPQICSACVRCKSCGATPGKNWDVEWSGDYSLCPRCTQLYEKGNYCPI
CTRCYEDNDYESKMMQCAQCDHWVHAKCEGLSDEDYEILSGLPDSVLYTCGPCAGATQPR
WREALSGALQGGLRQVLQGLLSSKVAGPLLLCTQCGQGGKQLHPGPCDLQTVGQRFEEGH
YKSVHSFMEDMVSILMRHSEGETSERRAGSQMKGLLLKLLESAFGWFDAHDPKYWRRSTR
LPNGVLPNAVLPPSLDHVYAQWRQQESETPESGQPPGEPSAAFQGKDPAAFSHIEDPRQC
ALCLKYGDADSKEAGRLLYIGQNEWTHVNCAIWSAEVFEENDGSLKNVHAAVARGRQMRC
ELCLKPGATVGCCLSSCLSNFHFMCARASYCIFQDDKKVFCQKHTDLLDGKEIVTPDGFD
VLRRVYVDFEGINFKRKFLTGLEPDAINVLIGSIRIDSLGTLSDLSDCEGRLFPIGYQCS
RLYWSTVDARRRCWYRCRILEYRPWGPREEPVHLEAAEENQTIVHSPTFSLETPDHEDPS
PDTDALILGAPEHYSPVQNLDPPLRPDSSSGPPPAPRSFSGARIKVPNYSPSRRPLGGVS
FGPLPSPGSPSSLTHHIPTVGDPDFPAPPRRSRRPSPLTPRPPPSRRTSPPLRTSPQLRV
PPPTSVVTALTPTSGELAPPGLAPSPPPPPEDLGPDFEDMEVVSGLSAADLDFAASLLGT
EPFQEEIVAAGAVGSSHGGQGDSSEEEASPTTRYVHFPVTVVSGPTLGPGPLPGTPRIEQ
LDGVDDGTDSEAEAVQQPRGQGTPPSGPVVGRAGVLGAAGDRSRPPEDLPSEIVDFVLKN
LGGPGEGAAGPREESLPPAPPLANGSQAPQALPPSPADPTRTFAWLPGAPGVRVLSLGPA
PEPPKPATSKIILVNKLGQVFVKMAGEGEPVPAPVKQPPLPPTVPPAAPTSWTLPPGPLL
GVLPVVGVGVVRPAPPPPPAPLTLVFSSGPPSPPRQAIRVKRVSTFSGRSPSAPPPNKTP
RLDEEGESLEDTPQVPGLSSSGFSRVRMKTPTVRGVLDLDNEPLGEESLGPFQERSPLLP
LPEGGLRQTPDGPSDLLLESWHHYSGEASSSEEEPPSPEDKENQLPKRAGPHLRFEITSE
DGFSVEAESLEGAWRTLIEKVQEARGHARLRHLSFSGMSGARLLGIHHDAVIFLAEQLPG
AQRCQHYKFRYHQQGEGQEEPPLNPHGAARAEVYLRKCTFDMFNFLASQHRVLPEGATCD
EEEDEVQLRSTRRATSLELPMAMRFRHLKKTSKEAVGVYRSAIHGRGLFCKRNIDAGEMV
IEYSGIVIRSVLTDKREKFYDGKGIGCYMFRMDDFDVVDATMHGNAARFINHSCEPNCFS
RVIHVEGQKHIVIFALRRILRGEELTYDYKFPIEDASNKLPCNCGAKRCRRFLN
Download sequence
Identical sequences ENSCPOP00000003358 10141.ENSCPOP00000003358 ENSCPOP00000003358

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]