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Domain assignment for ENSCPOP00000006362 from Cavia porcellus 76_3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSCPOP00000006362
Domain Number 1 Region: 232-484
Classification Level Classification E-value
Superfamily Trypsin-like serine proteases 7.7e-87
Family Eukaryotic proteases 0.00012
Further Details:      
 
Domain Number 2 Region: 142-243
Classification Level Classification E-value
Superfamily SRCR-like 5.49e-20
Family Scavenger receptor cysteine-rich (SRCR) domain 0.086
Further Details:      
 
Domain Number 3 Region: 106-145
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000628
Family LDL receptor-like module 0.002
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000006362   Gene: ENSCPOG00000007052   Transcript: ENSCPOT00000007122
Sequence length 487
Comment pep:novel scaffold:cavPor3:scaffold_90:2117931:2131976:-1 gene:ENSCPOG00000007052 transcript:ENSCPOT00000007122 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MDLNSGSPPGIEPCYTNHGYQPEHLHSAQLPTAPSIYAVYPPQHYPPAVPQYTPRVPTHA
PTHVLHRRPKSSGTCTPKTKWQLCLVLGAILVAILLTGILLWKLLQKDCSVSGMKCGSSG
ICVSASLWCDGAEQCPNGEDENRCVRLYGPNFILQVYSSKRKSWYPVCYDDWSESYARVA
CMDMGYGNSFYSTRGVADDSGATSFMKLNRSSSSTNFYKKLTLSDTCSSRSMVSLRCVEC
GVRSPAIQSRIVGGSAASLGQWPWQVSLHVQGVHVCGGSILTPQWIVTAAHCVEGPLNNA
RYWTVFAGILKQSLMFYGNAIHVEKVIPHPSYDSTSKNYDIALFKLQTPLSFTDSVKPVC
LPNPGLGLNPEQQCWISGWGATYEKGKTSNELNSASVSLIENSKCNSKLIYNNLITPEMI
CAGILVGGVDSCQGDSGGPLVTNKNGIWWLIGDTSWGSGCAQPFRPGVYGNVSVFTDWIY
QQMRVTL
Download sequence
Identical sequences ENSCPOP00000006362 10141.ENSCPOP00000006362 ENSCPOP00000006362

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