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  Home > Genomes > Cavia porcellus 76_3 > ENSCPOP00000013979

Domain assignment for ENSCPOP00000013979 from Cavia porcellus 76_3

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSCPOP00000013979
Domain Number 1 Region: 613-728
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 1.31e-33
Family Spermadhesin, CUB domain 0.00064
Further Details:      
 
Domain Number 2 Region: 1830-1950
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 1.06e-32
Family Spermadhesin, CUB domain 0.00076
Further Details:      
 
Domain Number 3 Region: 1313-1419
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 1.2e-32
Family Spermadhesin, CUB domain 0.00038
Further Details:      
 
Domain Number 4 Region: 1657-1777
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 1.7e-32
Family Spermadhesin, CUB domain 0.00075
Further Details:      
 
Domain Number 5 Region: 445-554
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 4.32e-32
Family Spermadhesin, CUB domain 0.00048
Further Details:      
 
Domain Number 6 Region: 1132-1253
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 3.01e-30
Family Spermadhesin, CUB domain 0.00076
Further Details:      
 
Domain Number 7 Region: 70-172
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 1.27e-29
Family Spermadhesin, CUB domain 0.0012
Further Details:      
 
Domain Number 8 Region: 2001-2120
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 3.53e-29
Family Spermadhesin, CUB domain 0.0011
Further Details:      
 
Domain Number 9 Region: 273-383
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 2.22e-28
Family Spermadhesin, CUB domain 0.0014
Further Details:      
 
Domain Number 10 Region: 2188-2291
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 2.09e-27
Family Spermadhesin, CUB domain 0.0013
Further Details:      
 
Domain Number 11 Region: 972-1075
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 4.19e-26
Family Spermadhesin, CUB domain 0.0013
Further Details:      
 
Domain Number 12 Region: 792-901
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 1.22e-25
Family Spermadhesin, CUB domain 0.0012
Further Details:      
 
Domain Number 13 Region: 1486-1595
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 9.55e-23
Family Spermadhesin, CUB domain 0.0028
Further Details:      
 
Domain Number 14 Region: 2541-2609
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 9.04e-20
Family Complement control module/SCR domain 0.00091
Further Details:      
 
Domain Number 15 Region: 2598-2667
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 1.32e-18
Family Complement control module/SCR domain 0.0011
Further Details:      
 
Domain Number 16 Region: 2781-2849
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 9.31e-18
Family Complement control module/SCR domain 0.00081
Further Details:      
 
Domain Number 17 Region: 2897-2968
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 1.89e-17
Family Complement control module/SCR domain 0.0013
Further Details:      
 
Domain Number 18 Region: 2838-2908
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 5.14e-16
Family Complement control module/SCR domain 0.00096
Further Details:      
 
Domain Number 19 Region: 2657-2724
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000000153
Family Complement control module/SCR domain 0.0017
Further Details:      
 
Domain Number 20 Region: 3015-3072
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000000208
Family Complement control module/SCR domain 0.00074
Further Details:      
 
Domain Number 21 Region: 210-282
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000000723
Family Complement control module/SCR domain 0.0012
Further Details:      
 
Domain Number 22 Region: 3077-3145
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000000729
Family Complement control module/SCR domain 0.0016
Further Details:      
 
Domain Number 23 Region: 389-450
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000000139
Family Complement control module/SCR domain 0.001
Further Details:      
 
Domain Number 24 Region: 2713-2774
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000000208
Family Complement control module/SCR domain 0.0015
Further Details:      
 
Domain Number 25 Region: 1252-1316
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000000216
Family Complement control module/SCR domain 0.0013
Further Details:      
 
Domain Number 26 Region: 2355-2422
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000000256
Family Complement control module/SCR domain 0.002
Further Details:      
 
Domain Number 27 Region: 1426-1489
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000000256
Family Complement control module/SCR domain 0.0016
Further Details:      
 
Domain Number 28 Region: 1948-2017
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000000337
Family Complement control module/SCR domain 0.0014
Further Details:      
 
Domain Number 29 Region: 2957-3020
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000000337
Family Complement control module/SCR domain 0.0014
Further Details:      
 
Domain Number 30 Region: 1077-1149
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000000375
Family Complement control module/SCR domain 0.0018
Further Details:      
 
Domain Number 31 Region: 559-627
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000000653
Family Complement control module/SCR domain 0.001
Further Details:      
 
Domain Number 32 Region: 2483-2545
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000000764
Family Complement control module/SCR domain 0.0021
Further Details:      
 
Domain Number 33 Region: 734-794
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000000125
Family Complement control module/SCR domain 0.0014
Further Details:      
 
Domain Number 34 Region: 1602-1665
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000000208
Family Complement control module/SCR domain 0.002
Further Details:      
 
Domain Number 35 Region: 1776-1841
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000000351
Family Complement control module/SCR domain 0.0017
Further Details:      
 
Domain Number 36 Region: 6-66
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000000567
Family Complement control module/SCR domain 0.0011
Further Details:      
 
Domain Number 37 Region: 2293-2361
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000112
Family Complement control module/SCR domain 0.0017
Further Details:      
 
Domain Number 38 Region: 2119-2183
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000337
Family Complement control module/SCR domain 0.0023
Further Details:      
 
Domain Number 39 Region: 907-967
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000756
Family Complement control module/SCR domain 0.0012
Further Details:      
 
Domain Number 40 Region: 3136-3193
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000000000514
Family Complement control module/SCR domain 0.0027
Further Details:      
 
Domain Number 41 Region: 2436-2493
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000236
Family Complement control module/SCR domain 0.0027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000013979   Gene: ENSCPOG00000015501   Transcript: ENSCPOT00000015653
Sequence length 3426
Comment pep:known_by_projection scaffold:cavPor3:scaffold_1:69742957:70450826:1 gene:ENSCPOG00000015501 transcript:ENSCPOT00000015653 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
VLPSHTCGNPGEILKGILHGTRFNIGDKVRYSCLPGYILEGHAILTCIVSPGNGASWDFP
APFCRAEGACGGTLRGTSSTISSPHFPSEYENNADCTWTVLAEPGDTIALVFTDFQLEDG
YDFLEISGTEAPSIWLTGINLPSPVISSKNWLRLHFTSDSNHRRKGFSAQFQVKKAIELK
SRGVKMLPSKDSNHKNSVLSQGGVSSASDMCPDPGIPENGRRVGSDFRVGANVQFSCEDN
YVIQGSKAITCQRVTETLAAWSDHRPICRARTCGSNLRGPSGVITSPNYPVQYEDNAHCV
WVITTADPDKVIKLAFEEFELERGYDTLTVGDAGKVGDTRSVLYVLTGSSVPDLIVSMSN
QMWLHLQSDDSIGSPGFKAVYQEIEKGGCGDPGVPAYGKRTGSSFLHGDTLTFECQAAFE
LVGERVITCQQNNQWSGNKPSCVFSCFFNFTASSGIILSPNYPEEYGNNMNCVWLIISEP
GSRIHLIFNDFDVEPQFDFLAVKDDGISDVTVLGTFSGNEVPAQLASSGHIVRLEFQSDH
STTGRGFNITYTTFGQNECHDPGIPINGRRFGDRFLLGSSVSFHCEDGFVKTQGSESITC
ILQDGNVVWSSTVPRCEAPCGGHLTASSGVILPPGWPGYYKDSLNCEWIIEAKPGHSIKI
TFDRFQTEVNYDTLEVRDGPASSSPLIGEYHGTQAPQFLISTGNYMYLLFSTDSSRASVG
FLIHYESVTLESDSCLDPGIPVNGHRHGSNFGIRSTVTFSCDPGYTLSDEEPLVCERNHQ
WNHALPSCDALCGGYIQGKSGTVLSPGFPDFYPNSLNCTWTIEVSHGKGVQMIFHTFHLE
SSHDFLLITEDGSFSQPVARLTGSVLPHTIKAGLFGNFTAQLRFISDFSISYEGFNITFS
EYDLEPCDDPGVPAFSRRIGFHFGVGDALTFSCFPGYRLEGAAKLTCLGGGRRVWSAPLP
RCVAECGASVKGNEGTLLSPNFPSNYDNNHECIYKIETEAGKGIHLRARSFQLFEGDTLK
VYDGKDSSSRPLGTFTRNELLGLLLNSTSNHLWLEFNTNGSGTDLGFQLTYTSFDLVKCE
DPGSPNYGYRIRDEGHFTDTVVLYSCNPGYAMHGSSTLTCLSGDRRVWDKPVPSCVAECG
GHIHTATSGRILSPGYPAPYDNNLHCTWTVEADPGRTISLHFIVFDTELAHDILKVWDGP
VDSDILLKEWSGSALPEDIHSTFNSLTLQFDSDFFISKSGFSIQFSTSVASTCNDPGMPQ
NGTRYGDSREPGDTLTFQCDPGYQLQGQAKVTCVQLNNRFFWQPDPPTCIAACGGNLTGP
SGVILSPNYPQPYPPGKECDWRVKVNPDFVIALIFRSFNMEPSYDFLHIYEGEDSNSPLV
GSFQGSQAPDRIESSGNSLFLAFRSDASVGLSGFAIEFKEKPREACFDPGNIMNGTRVGT
DFKLGSTVTYQCDSGYRIVEPSSITCVIGTDGKPSWDHVLPSCRAPCGGQYSGSEGVVLS
PNYPHNYTAGQVCLYTITVPKEFVVFGQFASFQTALSDMAELFDGAQPQARLLSSLSGSH
SGETLPLATSNQILLRFSANSGASARGFHFLYQAVPRTSDTQCSSVPEPRYGRRIGSEFS
AGSIVRFECSPGYLLQGSSAIRCQSVPNALAQWNDTIPSCVVPCSGNFTQRRGTILSPGY
PEPYGNNLNCVWRILVTEGSGIQIQVISFATEQNWDSLEIHDGGDVSAPRLGSFSGTTVP
ALLNSTSNQLYLHFQSDISVAAAGFHLEYKTVGLAACQEPALPSNGIKLGDRYMVNDVLS
FQCEPGYTLQGRSHISCMPGTVRRWNYPSPLCIATCGGMLTDPGGVILSPGFPGSYPNNL
DCTWKISLPIGYGTHIQFLNFSTEANHDYLEVQNGPYPTSPMIGQFSGPDLPLSLLSTTH
ETLIRFYSDHSQNRQGFKLTYQAYELQNCPDPPPFQNGYMVNSDYSVGQSISFECYPGYI
LIGHPVLTCQHGTNRNWNHPFPRCDAPCGYNVTSQNGTIYSPGFPDEYPILKDCLWLITV
PPGHGVYINFTLLQTEAVNDYIAVWDGPDQNAPQLGVFSGNTALETAYSSTNQVLLRFHS
DFSNGGFFVLNFHAFQLKKCPPPPAVPHADMLTEDEDFEIGDFVKYQCHPGYTLSGRDTL
TCKLSAQLQFEGVAPTCEAQCPANEIRTESSGVILSPGYPGNYFNSQTCSWSIKVDPSFN
ITIFVDSFQSEKQFDSLEVFDGSSGQSPLLVILSGNHSEQSNFTSRGHQLFLRWSTDHAT
SKRGFRIRYTAPYCSLSSTLKNGGVVNRTVGAVGSTVRYFCKPGYRMVGPSNATCVRSPM
GMYQWDSLTPICQAVSCGIPEAPGNGSFTGNEFTLDNKVMYECNEGFRLEASQQASAVCR
EDGTWSNRGKTPACKPVLCPSIEAQLSEHILWRLVSGSLNEYGAQVLLSCSPGYYLEGRR
LLQCQANGTWNTGDERPRCRVISCGSLSFPPNGNKIGTLTVFGATAIFTCNTGYTLVGSH
VRECLANGLWSGSETRCLAGHCGSPDPIVNGHISGDGFSYRDTVVYQCNPGFRLVGTSVR
ICLQDHKWSGQTPVCVPITCGHPGNPAHGVTNGSEFNLNDLVNFTCDTGYLLQGSSRAQC
RSNGQWSSPLPTCRVVNCSDPGFVDNAVRHGPQSFPESFEYGTSVLYHCKKGFYLLGSSA
LTCMASGLWDRSLPTCLAISCGHPGVPANAVLTGELFTYGARVQYSCKGGQSLTGNSTRI
CQEDSHWSGALPHCSGSSPGFCGDPGTPAHGSRLGDEFKTKSLLRFSCEMGYQLRGSAER
MCLPNGSWSGVQPACEAVSCGNPGTPTNGRIVSSDGVLFSSSVVYACWEGYKTSGLTTRH
CTANGTWTGTAPDCTIISCGDPGTLPNGVQFGTDFTFNKTVSYQCNPGYLMEPVSACVIR
CTKDGTWNQSKPVCKAVLCGQPPAVPDGKVEGTDFHWGASISYSCADGFQLSHSAILSCE
GHGVWKGEVPQCLPVFCGDPGIPAEGRVSGKSFTFRSEVFFQCKAPFILVGSSRRTCQAD
GTWSGIQPTCIDPAHNTCPDPGTPHFGIQNSSRGYEVGSTVFFRCRKGYHVQGSTTRTCL
ANLTWSGMQTECTPHACRQPETPAHADVRAIDLPTFGYTLVYTCHPGFFLAGGSEHRTCK
ADMKWTGKSPVCKSKGVREVNETVTKTPVPSDVFFANSVWKGYYEYLGKRQPATLTVDWF
NATSSKVNATFTTAPQVQLDLTGVYKKEEAHLLLKAFQMKGPVDIFVSKFENDNWGLDGY
VSSGLEKEGFTFQGDIHGKDFGKFKLERQDPSSSDQDPSNQYHGTSSGSVAAAILVPFFA
LILSGFAFYLYKHRTRPKVQYNGYAGHENSNGQASFENPMYDTNLKPTEAKAVRFDTTLN
TVCTVV
Download sequence
Identical sequences 10141.ENSCPOP00000013979 ENSCPOP00000013979 ENSCPOP00000013979

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.