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Domain assignment for ENSCPOP00000019896 from Cavia porcellus 76_3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSCPOP00000019896
Domain Number 1 Region: 612-666
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.49e-16
Family Classic zinc finger, C2H2 0.011
Further Details:      
 
Domain Number 2 Region: 696-751
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000000506
Family Classic zinc finger, C2H2 0.038
Further Details:      
 
Domain Number 3 Region: 283-331
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000937
Family Classic zinc finger, C2H2 0.028
Further Details:      
 
Domain Number 4 Region: 449-498
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000782
Family Classic zinc finger, C2H2 0.019
Further Details:      
 
Domain Number 5 Region: 371-422
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000172
Family Classic zinc finger, C2H2 0.011
Further Details:      
 
Domain Number 6 Region: 657-698
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000572
Family Classic zinc finger, C2H2 0.022
Further Details:      
 
Domain Number 7 Region: 741-792
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000175
Family Classic zinc finger, C2H2 0.046
Further Details:      
 
Domain Number 8 Region: 539-589
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000252
Family Classic zinc finger, C2H2 0.037
Further Details:      
 
Weak hits

Sequence:  ENSCPOP00000019896
Domain Number - Region: 343-365
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0232
Family Classic zinc finger, C2H2 0.043
Further Details:      
 
Domain Number - Region: 103-130
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0491
Family Classic zinc finger, C2H2 0.034
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000019896   Gene: ENSCPOG00000023446   Transcript: ENSCPOT00000021556
Sequence length 1052
Comment pep:novel scaffold:cavPor3:scaffold_90:2262240:2288618:-1 gene:ENSCPOG00000023446 transcript:ENSCPOT00000021556 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
LQVFRKDGHPVCFDTSNEDDCNWMMLVRPAAEPGHQNLTAFQQGSDVYFTTSCDIPPGTE
LRVWYAAFYAKKMDKPMLKQAGSNGHATGTPEVSTPAEAERERGPWACKVCASSFLELQL
LNEHLLGHLEHGKGLPPGSQPEAAAEPEKEPSAPCGEPPTAPESTTAAAESSGPPKEQRK
KPRRGRKPKGSKPQQPLVISEGKEPAEQVAEIITEVPPDEPASETPDERIMELVLGKLAT
PSDTISSVPKFTSSALALKRGLVLASRHGIRRKLARQLGEHKRVHQCEVCSKVFQNSSNL
SRHVRSHGDKLFKCEECAKLFSRKESLKQHVSYKHSRNEVDSEYRHRCGTCGKTFRMESA
LEFHNCRTDDKTFQCEMCFRFFSTNSNLSKHKKKHGDKKFACGVCSKMFYRKDVMLDHQR
RHLEGVRRVKREELEASTESLVRYKKEPSGCPVCGKVFSCRSNMNKHLLTHGDKKYTCEI
CGRKFFRVDVLRDHIHVHFKDIALMDDHQREEFIGKIGISSEENEDNSDESADSEPHKYS
CKRCQLTFGRGKEYLKHIMEVHKEKGYGCSICHRRFALKATYHAHMVIHRENLPDPNVQK
YIHPCEICGRIFNSIGNLERHKLIHTGVKSHACEQCGKPFARKDMLKEHMRVHDNIREYL
CAECGKGMKTKHALRHHMKLHKGIKEYECKECHRKFAQKVNMLKHYKRHTGIKDFMCELC
GKTFSERNTMETHKLIHTVGKQWTCSVCDKKYVTEYMLQKHVQLTHDKVEAQSCQLCGTK
VSTRASMSRHMRRKHPEVLAVRIDDLDHLPETTTIDASSIGIVQPELSLEQEEMAEGKHS
KAAKRNHKRKQKPEEDAGAPVPEDATFSEYSEKEPEFTGSVGDETSSAVQSIQQVVVTLG
DPNVTTPSSSVGLTNITVTPITTSAGTQFTNLQPVAVGHLTAPERQLQLDNSILTVTFDT
VSGSAMLHNRPSEVQIHPQPEASNPQSVAHFINLTTLVNSITPLGNQLSEQHPLTWRAVP
QTDVLPPPQPPAPPQQAAPPQAPAEQPQMYSY
Download sequence
Identical sequences 10141.ENSCPOP00000019896 ENSCPOP00000019896 ENSCPOP00000019896

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