SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSGGOP00000017374 from Gorilla gorilla 76_3.1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSGGOP00000017374
Domain Number 1 Region: 10-137,169-276
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 4.46e-77
Family Calponin-homology domain, CH-domain 0.0000352
Further Details:      
 
Weak hits

Sequence:  ENSGGOP00000017374
Domain Number - Region: 332-441
Classification Level Classification E-value
Superfamily Spectrin repeat 0.000667
Family Spectrin repeat 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGGOP00000017374   Gene: ENSGGOG00000025397   Transcript: ENSGGOT00000028128
Sequence length 519
Comment pep:novel chromosome:gorGor3.1:14:44919344:44957865:1 gene:ENSGGOG00000025397 transcript:ENSGGOT00000028128 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
VQEVSEASGFITAVVLSLIAEQEDTQKKAFTCWINSQLARHTSPSVISDLFTDIKKGHVL
LDLLEVLSGQQLPRDKGSNTFQCRINIEHALTFLRNRSIKLINIHVTDIIDGNPSIILGL
IWTIILHFHIEKLAQTLSCNYNQPSLDDVSVVDSSPASSPPAKKCSKVQARWQMSARKAL
LLWAQEQCATYESVNVTDFKSSWRNGMAFLAIIHALRPDLIDMKSVKHRSNKDNLREAFR
IAEQELKIPRLLEPEDVDVVDPDEKCIMTYVAQFLQYSKDAPGTGEEAQGKVKDAMGWLT
LQKEKLQKLLKDSENDTYFKKYNSLLSFMESFNEEKKSFLDVLSIKRDPDELDKDHLQLR
EAWDGLDHQINAWKIKLNYALPPPLHQTEAWLQEVEELMDEDLSASQDHSQAVTLIQEKM
TLFKSLMDRFEHHSNILLTFENKDENHLPLVPPNKLEEMKRRINNILEKKFILLLEFHYY
KCLVLGLVDEVKSKLDIWNIKYGSRESVELLLEDWHKFL
Download sequence
Identical sequences ENSGGOP00000017374 ENSGGOP00000017374

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]