SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSGGOP00000017933 from Gorilla gorilla 76_3.1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSGGOP00000017933
Domain Number 1 Region: 145-381
Classification Level Classification E-value
Superfamily vWA-like 3.89e-63
Family Integrin A (or I) domain 0.00000326
Further Details:      
 
Domain Number 2 Region: 432-479
Classification Level Classification E-value
Superfamily Integrin domains 0.000000000000575
Family Integrin domains 0.0041
Further Details:      
 
Domain Number 3 Region: 44-102
Classification Level Classification E-value
Superfamily Plexin repeat 0.00000000000157
Family Plexin repeat 0.00072
Further Details:      
 
Domain Number 4 Region: 597-636
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000276
Family Integrin beta EGF-like domains 0.0056
Further Details:      
 
Domain Number 5 Region: 553-591
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000586
Family Integrin beta EGF-like domains 0.051
Further Details:      
 
Weak hits

Sequence:  ENSGGOP00000017933
Domain Number - Region: 516-553
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0022
Family Integrin beta EGF-like domains 0.02
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGGOP00000017933   Gene: ENSGGOG00000002471   Transcript: ENSGGOT00000023513
Sequence length 775
Comment pep:known_by_projection chromosome:gorGor3.1:7:20512971:20582284:1 gene:ENSGGOG00000002471 transcript:ENSGGOT00000023513 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MCGSALAFFTAAFVCLQNDRRGPASFLWAAWVFSLVLGLGQGEDNRCASSNAASCARCLA
LGPECGWCVQEDFISGGSRSERCDIVSNLISKGCSVDSIEYPSVHVIIPTENEINTQVTP
GEVSIQLRPELGAEANFMLKVHPLKKYPVDLYYLVDVSASMHNNIEKLNSVGNDLSRKMA
FFSHDFRLGFGSYVDKTVSPYISIHPERIHNQCSDYNLDCMPPHGYIHVLSLTENITEFE
KAVHRQKISGNIDTPEGGFDAMLQAAVCESHIGWRKEAKRLLLVMTDQTSHLALDSKLAG
IVVPNDGNCHLKNNVYVKSTTMKHENYAEICVVPMEWNILIKLDVVGKSYHIQEHILPLV
VGQMLTDTSLKVSSLNKCLLSDYFYAICLFPLKNHADKRFLSYYNIPYICLEKRFLSRAQ
KICFCRLENSTNLVLFNVTVTMKKCDVTGGKNYAIIKPIGFNETAKIHIHRNCSCQCEDN
RGPKGKCVDETFLDSKCFQCDENKCHFDEDQFSSESCKSHKDQPVCSGRGVCVCGKCSCH
KIKLGKVYGKYCEKDDFSCPYHHGNLCAGHGECEAGRCQCFSGWEGDRCQCPSAAAQHCV
NSKGQVCSGRGTCVCGRCECTDPRSIGRFCEHCPTCYTACKENWNCMQCLHPHNLSQAIL
DQCKTSCALMEQQHYVDQTSECFSSPSYLRIFFIIFIVTFLIGLLKVLIIRQVILQWNSN
KIKSSSDYRVSASKKDKLILQSVCTRAVTYRREKPEEIKMDISKLNAHETFRCNF
Download sequence
Identical sequences ENSGGOP00000017933 ENSGGOP00000002435

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]