SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSGGOP00000020441 from Gorilla gorilla 76_3.1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSGGOP00000020441
Domain Number 1 Region: 94-197
Classification Level Classification E-value
Superfamily PDZ domain-like 3.42e-23
Family PDZ domain 0.027
Further Details:      
 
Domain Number 2 Region: 628-713
Classification Level Classification E-value
Superfamily PDZ domain-like 6.05e-21
Family PDZ domain 0.0000184
Further Details:      
 
Domain Number 3 Region: 416-516
Classification Level Classification E-value
Superfamily PDZ domain-like 6.44e-21
Family PDZ domain 0.00000658
Further Details:      
 
Domain Number 4 Region: 522-616
Classification Level Classification E-value
Superfamily PDZ domain-like 6.05e-20
Family PDZ domain 0.00000813
Further Details:      
 
Domain Number 5 Region: 195-299
Classification Level Classification E-value
Superfamily PDZ domain-like 1.01e-19
Family PDZ domain 0.0000992
Further Details:      
 
Domain Number 6 Region: 8-95
Classification Level Classification E-value
Superfamily PDZ domain-like 1.13e-18
Family PDZ domain 0.011
Further Details:      
 
Domain Number 7 Region: 950-1048
Classification Level Classification E-value
Superfamily PDZ domain-like 9.33e-18
Family PDZ domain 0.00000841
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGGOP00000020441   Gene: ENSGGOG00000000298   Transcript: ENSGGOT00000033438
Sequence length 1086
Comment pep:known_by_projection chromosome:gorGor3.1:12:64669132:64869017:-1 gene:ENSGGOG00000000298 transcript:ENSGGOT00000033438 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
LTEEFKGSTVVELMKKEGTTLGLTVSGGIDKDGKPRVSNLRQGGIAARSDQLDVGDYIKG
VNGINLAKFRHDEIISLLKNVGERVVLEVEYELPPVSVQGSSVIFRTVEVTLHKEGNTFG
FVIELGGAHDDRNKSRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSI
LKQCGQEATLLIEYDVSVMDSVATASGPLLVEVAKTPGASLGVALTTSMCCNKQVIVIDK
IKSASIADRCGALHVGDHILSIDGTSMEYCTLAEATQFLANTTDQVKLEILPHHQTRLAL
KGPDHVKIQRSDRQLTWDSWASNHSSLHTNHHYNTYHPDHCRVPALTFPKAPPPNSPPAL
VSSSFSPTSMSAYSLSSLNMGTLPRSLYSTSPRGTMMRRRLKKKDFKSSLSLASSTVGLA
GQVVHTETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGD
RVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIEFDVAESVIPSSGTFHVKLPKKHNV
ELGITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDNCSMEDAVQI
LQQCEDLVKLKIRKDEDNSDEQESSGAIIYTVELKRYGGPLGITISGTEEPFDPIIISSL
TKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQTDAQSASS
PKKFPISSHLSDLGDVEEDSSPAQKPGKLSDMYPSTVPSVDSAVDSWDGSAIDTSYGTQG
TSFQASGYNFNTYDWRSPKQRGSLSPVTKPRSQTYPDVGLSNEDWDRSTASGFAGAADSA
ETEQEENFWSQALEDLETCGQSGILRELEEKADRRVSLRNMTLLATIMSGSTMSLNHEAP
TPRSQLGRQASFQERSSSRPHYSQTTRSNTLPSDVGRKSVTLRKMKQEIKEIMSPTPVEL
HKVTLYKDSDMEDFGFSVADGLLEKGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDF
DCCLVVPLIAESGNKLDLVISRNPLASQKSIEQQSLPGDWSEQNSAFFQQPSHGGNLETR
EPTNTL
Download sequence
Identical sequences ENSGGOP00000000294 ENSGGOP00000020441

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]