SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSGGOP00000020716 from Gorilla gorilla 76_3.1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSGGOP00000020716
Domain Number 1 Region: 157-228
Classification Level Classification E-value
Superfamily Homeodomain-like 5.13e-18
Family Homeodomain 0.0000547
Further Details:      
 
Domain Number 2 Region: 34-100
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 1.92e-16
Family LIM domain 0.022
Further Details:      
 
Domain Number 3 Region: 3-32
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.0000143
Family LIM domain 0.018
Further Details:      
 
Weak hits

Sequence:  ENSGGOP00000020716
Domain Number - Region: 97-123
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.00235
Family LIM domain 0.025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGGOP00000020716   Gene: ENSGGOG00000024385   Transcript: ENSGGOT00000024673
Sequence length 328
Comment pep:known_by_projection chromosome:gorGor3.1:15:55982990:55987068:1 gene:ENSGGOG00000024385 transcript:ENSGGOT00000024673 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
KPGTAMCVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRD
YVRLFGIKCAKCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCR
ADHGLLLERAAAGSPRSPGPLPARLHLPADAGSGRQPALRPHVHKQTEKTTRVRTVLNEK
QLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKKSILMKQLQQQQH
SDKTSLQGLTGTPLVAGSPIRHENAVQGSAVEVQTYQPPWKALSEFALQSDLDQPAFQQL
NSSGSDVTSLSSQLPDTPNSMVPSPVET
Download sequence
Identical sequences ENSGGOP00000020716

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]