SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

  Home > Genomes > Gorilla gorilla 76_3.1 > ENSGGOP00000001011

Domain assignment for ENSGGOP00000001011 from Gorilla gorilla 76_3.1

Domain architecture

Domain assignment details

(show help)
Strong hits

Sequence:  ENSGGOP00000001011
Domain Number 1 Region: 468-724
Classification Level Classification E-value
Superfamily YWTD domain 6.8e-61
Family YWTD domain 0.000000943
Further Details:      
 
Domain Number 2 Region: 1382-1639
Classification Level Classification E-value
Superfamily YWTD domain 2.49e-57
Family YWTD domain 0.0000033
Further Details:      
 
Domain Number 3 Region: 770-1026
Classification Level Classification E-value
Superfamily YWTD domain 2.49e-55
Family YWTD domain 0.00000145
Further Details:      
 
Domain Number 4 Region: 1077-1330
Classification Level Classification E-value
Superfamily YWTD domain 6.02e-47
Family YWTD domain 0.00000349
Further Details:      
 
Domain Number 5 Region: 291-331
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000038
Family LDL receptor-like module 0.00067
Further Details:      
 
Domain Number 6 Region: 381-460,716-764
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000000013
Family Growth factor receptor domain 0.018
Further Details:      
 
Domain Number 7 Region: 255-293
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000157
Family LDL receptor-like module 0.00082
Further Details:      
 
Domain Number 8 Region: 170-210
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000209
Family LDL receptor-like module 0.00067
Further Details:      
 
Domain Number 9 Region: 95-133
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000484
Family LDL receptor-like module 0.00078
Further Details:      
 
Domain Number 10 Region: 336-372
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000602
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 11 Region: 1336-1381
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000678
Family EGF-type module 0.0088
Further Details:      
 
Domain Number 12 Region: 131-169
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000419
Family LDL receptor-like module 0.00081
Further Details:      
 
Domain Number 13 Region: 214-252
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000694
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 14 Region: 1032-1085
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000898
Family EGF-type module 0.011
Further Details:      
 
Domain Number 15 Region: 53-95
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000017
Family LDL receptor-like module 0.001
Further Details:      
 
Weak hits

Sequence:  ENSGGOP00000001011
Domain Number - Region: 1639-1676
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00106
Family EGF-type module 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGGOP00000001011   Gene: ENSGGOG00000001024   Transcript: ENSGGOT00000001034
Sequence length 1932
Comment pep:known_by_projection chromosome:gorGor3.1:11:47622150:47682546:-1 gene:ENSGGOG00000001024 transcript:ENSGGOT00000001034 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
VALGLRAGERTRSGPGSSSPSGGISGGASAGSGLGRGSGLGRGAGLASSPECACGRSHFT
CAVSALGECTCIPAQWQCDGDNDCGDHSDEDGCILPTCSPLDFHCDNGKCIRRSWVCDGD
NDCEDDSDEQDCPPRECEEDEFPCQNGYCIRSLWHCDGDNDCGDNSDEQCDMRKCSDKEF
RCSDGSCIAEHWYCDGDTDCKDGSDEENCPSAVPAPPCNLEEFQCAYGRCILDIYHCDGD
DDCGDWSDESDCSSHQPCRSGEFMCDSGLCINAGWRCDGDADCDDQSDERNCTTSMCTAE
QFRCHSGRCVRLSWRCDGEDDCADNSDEENCENTGSPQCASDQFLCWNGRCIGQRKLCNG
VNDCGDNSDESPQQNCRPRTGEENCNVNNGGCAQKCQMVRGAVQCTCHTGYRLTEDGHTC
QDVNECAEEGYCSQGCTNSEGAFQCWCETGYELRPDRRSCKALGPEPVLLFANRIDIRQV
LPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESP
GGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIALHPMEGTIYWTDW
GNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRK
AVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQ
RQPAGKNRCGDNNGGCTHLCLPSGQNYTCACPTGFRKISSHACAQSLDKFLLFARRMDIR
RISFDTEDLSDDVIPLADVRSAVALDWDSRDDHVYWTDVSTDTISRAKWDGTGQEVVVDT
SLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPRDIVVEPMGGYM
YWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLD
GSKRKVLIGSQLPHPFGLTLYGERIYWTDWQTKSIQSADRLTGLDRETLQENLENLMDIH
VFHRRRPPVSTPCAMENGGCSHLCLRSPNPSGFSCTCPTGINLLSDGKTCSPGMNSFLIF
ARRIDIRMVSLDIPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHRISRANLDGL
QHADIVTTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIV
LYHEMGFMYWTDWGENAKLERSGMDGSDRAVLINNNLGWPNGLTVDKASSQLLWADAHTE
RIEAADLNGANRHTLVSPVQHPYGLTLLDSYIYWTDWQTRSIHRADKGTGSNVILVRSNL
PGLMDIQAGDRAQPLGFNKCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPE
TYLLFSSRGSIRRISLDTSDHTDVHVPVPELNNVISLDYDSVDGKVYYTDVFLDVIRRAD
LNGSNMETVIGQGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEP
RAIAVFPRKGYLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVD
AHLDRIESADLNGKLRQVLVSHVSHPFALTQQDRWIYWTDWQTKSIQRVDKYSGRNKETV
LANVEGLMDIIVVSPQRQTGTNACGVNNGGCTHLCFARALDFVCACPDEPDSRPCSLVPG
LVPPAPRATGMSEKSPVLPNTPPTTLHSSTTRTRTSLEEVEGRCSERDARLGLCARSNEA
VPAAPGEGLHISYAIGGLLSILLILVVIAALMLYRHKKSKFTDPGMGNLTYSNPSYRTST
QEVKIEAIPKPAMYNQLCYKKEGGPDHNYTKEKIKIVEGICLLSGDDAEWDDLKQLRSSR
GGLLRDHVCMKTDTVSIQASSGSLDDTETEQLLQEEQSECSSVHTAATPERRGSLPDTGW
KHERKLSSESQV
Download sequence
Identical sequences ENSGGOP00000001011 ENSGGOP00000018403

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

Please send feedback, comments or questions to superfamily@cs.bris.ac.uk or use the feedback form.

© Copyright 2013 The SUPERFAMILY authors and Julian Gough.