SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSGGOP00000017022 from Gorilla gorilla 76_3.1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSGGOP00000017022
Domain Number 1 Region: 160-487
Classification Level Classification E-value
Superfamily WD40 repeat-like 9.89e-55
Family WD40-repeat 0.00049
Further Details:      
 
Domain Number 2 Region: 5-245
Classification Level Classification E-value
Superfamily YVTN repeat-like/Quinoprotein amine dehydrogenase 2.59e-17
Family YVTN repeat 0.048
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGGOP00000017022   Gene: ENSGGOG00000006408   Transcript: ENSGGOT00000023032
Sequence length 491
Comment pep:known_by_projection chromosome:gorGor3.1:17:9873019:9923159:1 gene:ENSGGOG00000006408 transcript:ENSGGOT00000023032 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
GPSNFGSVVVWSIAKRDAICGSPAAGLNVGNATNVIFSRCRDEMFMTAGNGTIRVWELDL
PNRKIWPTECQTGQLKRIVMSIGVDDDDSFFYLGTTTGDILKMNPRTKLLTDAGPAKDKF
SLGVSAIRCLKMGGLLVGSGAGLLVFCKSPGYKPIKKIQLQGRITSITLRGEGHQFLVGT
EESHIYRVSFTDFKETLIATCHFDAVEDIVFPFGTAELFATCSKKDIRVWHTSSNRELLR
ITVPNMTCHGIDFMRDGKSIISAWNDGKIRAFAPETGRLMYVINNAHRIGVTAIATTSDC
KRVISGGGEGEVRVWQIGCQTQKLEEALKEHKSSVSCIRVKRNNEECVTASTDGTCIIWD
LVRLRRNQMILANTLFQCVCYHPEEFQIITSGTDRKIAYWEVFDGTVIRELEGSLSGSIN
GMDITQEGVHFVTGGNDHLVKVWDYNECEVTHVGVGHSGNITRIRISPGNQYIVSVSADG
AILRWKYPYTS
Download sequence
Identical sequences ENSGGOP00000017022

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]