SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for jgi|Lotgi1|102587|e_gw1.1.1001.1 from Lottia gigantea

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  jgi|Lotgi1|102587|e_gw1.1.1001.1
Domain Number 1 Region: 130-667,795-994
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 2.13e-244
Family Motor proteins 0.000000000697
Further Details:      
 
Domain Number 2 Region: 1621-1809
Classification Level Classification E-value
Superfamily GTPase activation domain, GAP 4.32e-51
Family BCR-homology GTPase activation domain (BH-domain) 0.00013
Further Details:      
 
Domain Number 3 Region: 1556-1613
Classification Level Classification E-value
Superfamily Cysteine-rich domain 0.000000000000129
Family Protein kinase cysteine-rich domain (cys2, phorbol-binding domain) 0.0037
Further Details:      
 
Domain Number 4 Region: 3-107
Classification Level Classification E-value
Superfamily Ubiquitin-like 0.00000000827
Family Ras-binding domain, RBD 0.015
Further Details:      
 
Weak hits

Sequence:  jgi|Lotgi1|102587|e_gw1.1.1001.1
Domain Number - Region: 993-1042
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.0017
Family Motor proteins 0.032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) jgi|Lotgi1|102587|e_gw1.1.1001.1
Sequence length 1864
Sequence
METYMIRVYTGSLSQESEFVSVEAEKSTASVDITKVAVHKLKKLGNSDNFELAEVFISSG
QLCKERRLDPMDTPVGIQLLWPKIINADIDKGQGLLTGYRFYLRKKDPEVSHNSGWMECK
DTDTFLMSFLKQPIGNKEYTDLCNLPNLNEKTLLENLKTRFSNNYIYTYVGSILIAVNPF
KFFPIYNPKCVKMYQNKRLGELPPHIFAIADAAYYTMLRTKKNQCIVISGESGSGKTEST
NLLLHHLTALSHKGLHGSGVEQTILGAGPVLEAFGNAKTVHNNNSSRFGKFIQVNYKENG
MVHGAIVEKYLLEKSRIVSQAKNERNYHVFYYLLAGADDSERHSLNLSTPENYNYLSCSD
CITLDGTDEKYEFARLKQSMEMVGFSPETQKRIFSVLSAVLHLGNIEFKKKGDQHHDESV
SIKNEDDVKIISNLLKVKEKTVIEALTTKKTVAGDETVVINFKMEDAIATRNAMAKCIYG
ALFDWIVLKVNQALLAKKHNSDHQGNSIGVLDIFGFEDFGNNSYEQFCINYANEHLQYYF
NQHIFKFEQEEYTREGIQWKNIEFIDNTRCLELFSSKPKGLFCLLDEECNFPGATNDTLL
SKFNHLHKDNLYYEVPVLREQAFVIVHYAGKVKYQIKDFREKNSDHIRTEIVSVLKKSSL
SFVRELMGIDPVAVLRWAIVRAFFRCFFAFLDSGKRWRKHGGNKRLSDSQLLQDPNYNDN
LLNACHQVNTSSDEDIFYKGHETSCDDDLSVIENHLPKSKARIMRRASKLILKNKSFKPK
PRPPSLSFRDIRTLKAISVNTIYGGSVRQSSKKPPSVSAQFQWSLSRLMTTLNQANPFFI
RCIKSNSEKLPCTFDEEIVLRQSIITFSMILLNITGYSFDILISVFQEFIQLYKILLPRG
LLSSKEDVKIFLEHMTFSLEHYQIGKDKVFLRETEKMLLDEALHRAIMERVVRIQRWMKT
IIERQLFVKLRWASLILQKYVRRFLAVKKLHQLRNEEFAAVTIQRWYRGYRVRSFYHFTR
NMVILIQAQVRTFIDRKRLLDMCFICEVDSQKPGLSQGHGELKRILTISMTTFCLHNYFT
AIIVHLKLVQEKERQRIIEEEHRRREIKKHHEDMQSSASDEGVLMKGSSAEELEQVEEST
DGRSVLIRRGSQRWKPRPADSPTTPTETSKPSGISVVSPEQLKNIESAVSKGRDKPENHL
DPDKNLEVSQKSHKAMFQNLKNFLAGNYITFGTLKSFCCNVKINSKLFLASKVLNAALRN
SETISKLTYQVQIVLYRGIKYLPIILYELKHHIQNITERAKKRKDESDEEEESSKKPTEC
KLPFKWQNDFIWGTTVRVCLPSTIDLTPITRKKESVILKGIVNCFSKFFMCIVEESIKAG
WNRKKKRRQRSSQKVTSQDPQPTWSVAGTSQWQYPAELVITDLNEIMALDEFISKKYMEL
FKDSEKRSYTIFDKIFKGAIEDFRRDLKTLIGLFLFFQRDEVCVKYRDLLSNFEQVLKAG
VIRERTTATFPVTMGINAFHAFLDGFMKAQPKKKEKKEEKKTETKAVKKDKNKKDCTMDH
LGHKFLQVQFNIPTFCELCSSLIWIMEKGQVCQICKYTCHKKCCSKSSSACKGTLDNRGS
SGSVMNVPLQSLLAPNEKVPNIIEKLISVIEIQGLFIVGIYRKCGSAPKVRALLQEIDSD
QNNVKLEDYPVHVLCTVLKRFFRDLPEPLMTFDLYDEFLMAADIKDDKERIQTFSSVIAS
LPKPNFDLFERLIFHLARVAMHEDSNMMNAQALAIIFAPCLLRSNKNLQAQDCLKQVPKQ
NICLENIISERLKKLKATLSDINTLESAEKTATDRLTYLRASIRSPVSNLQLIYPVQRVH
SLCS
Download sequence
Identical sequences V4BHU1
XP_009043987.1.39240 jgi|Lotgi1|102587|e_gw1.1.1001.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]