SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for jgi|Lotgi1|104339|e_gw1.2.647.1 from Lottia gigantea

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  jgi|Lotgi1|104339|e_gw1.2.647.1
Domain Number 1 Region: 7-115
Classification Level Classification E-value
Superfamily Pentapeptide repeat-like 0.000000000353
Family Pentapeptide repeats 0.025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) jgi|Lotgi1|104339|e_gw1.2.647.1
Sequence length 119
Sequence
MFVGHGFTYHRFTAYRFVGHGFTNHRFTAYRFVGHGFTNQRFTAYRFVGHGFTNHRFTAY
RFVGHGFTNQRFTAYRFVGHGFTNHRFTAHRFVGHGFTNHRFTAYRFVGHGFTNHRFTA
Download sequence
Identical sequences V4AVD3
XP_009051638.1.39240 jgi|Lotgi1|104339|e_gw1.2.647.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]