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Domain assignment for jgi|Lotgi1|104847|e_gw1.3.24.1 from Lottia gigantea

Domain architecture


Domain assignment details

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Strong hits

Sequence:  jgi|Lotgi1|104847|e_gw1.3.24.1
Domain Number 1 Region: 467-517
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000171
Family Classic zinc finger, C2H2 0.011
Further Details:      
 
Domain Number 2 Region: 184-206,254-281
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000999
Family Classic zinc finger, C2H2 0.068
Further Details:      
 
Domain Number 3 Region: 385-437
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000327
Family Classic zinc finger, C2H2 0.025
Further Details:      
 
Domain Number 4 Region: 355-395
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000239
Family Classic zinc finger, C2H2 0.015
Further Details:      
 
Weak hits

Sequence:  jgi|Lotgi1|104847|e_gw1.3.24.1
Domain Number - Region: 600-625,658-683
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000292
Family Classic zinc finger, C2H2 0.026
Further Details:      
 
Domain Number - Region: 443-468
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000686
Family Classic zinc finger, C2H2 0.025
Further Details:      
 
Domain Number - Region: 211-272
Classification Level Classification E-value
Superfamily YbjQ-like 0.0131
Family YbjQ-like 0.012
Further Details:      
 
Domain Number - Region: 123-189
Classification Level Classification E-value
Superfamily SET domain 0.036
Family Viral histone H3 Lysine 27 Methyltransferase 0.074
Further Details:      
 
Domain Number - Region: 322-366
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0839
Family Classic zinc finger, C2H2 0.022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) jgi|Lotgi1|104847|e_gw1.3.24.1
Sequence length 888
Sequence
CEECMTSYSPQCPVHRAIVVSDKIVLSRAWSSLPQMLQIYRFNKIGVFAKKPVSKMTQFG
PFVADMVSSQDDLTNTRFLLMVLMNFFLYFQLEKNDGTLGYFETSDENKCNWMMFVRPAR
NFAEQNVVAYQYGQDIYFTVMKNIEARQELKVWYSAHYGARIGIPIHEITERDKEAMDEQ
EYKFPCYECNKKFRSAPALQRHLVVHEEAAARWFRNKGKQMKNGEGGESSGYQPDSEKIR
RTIQSMYKRKGKETGGNEWVCMHCDLTFDNSSLLNLHTLTHAAEDVGLEEIQKLSSVAAS
ITSENGEPSSDNGVVALNTILACPMCHAKFDDKNDLIAHATQHGTTKKKSLNALRPHKCT
SCWKAFGTQERLNKHMLCHGSEESKPLECNVCHKRLMNNSAMACHMKIHSDKKYYSCPMC
HEGFDQTHGLKEHCATHAVNGIYTCQVCQKQFPDFNQIRKHMRHLHSENEYPCLHCDKVF
ARPDKLKLHMLKHSTHREFMCENCGRQFKRKDKLKEHIKRMHIEQKETKITSSDERDKNL
KKFVPKVLPTDYQRFIYKCHTCLLGFKRRGMLVNHLAKRHPDITPDLVPELNLPILKTQK
DYYCQYCDKVYKSSSKRKSHIIKNHPGLDLPASSRKKSLTLDISGVPNPTYSQTVGSITT
LPQQCVFCHKQYASKAKLMQHQRKKHPDLVPPSNDRRKSGCKEDQITTTTVQLVDPNQQQ
LEAYQEVTVTQVPQVHDLQAADLLTQAMSELTQTLQEYRPATGGDYHALAARIAQGVQGP
AMVHVQPAQLQQLQHTTIELSHLGSTLAHAQITSSQPPQLIPAGTILTGTPQPPQSLSPQ
PQAPQAVPVSLVVTNPGTPNLATSVANGLPQNYVQGVRQNWQPYQGFR
Download sequence
Identical sequences V4AAR1
XP_009055474.1.39240 jgi|Lotgi1|104847|e_gw1.3.24.1

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