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Domain assignment for jgi|Lotgi1|165708|fgenesh2_pg.C_sca_53000051 from Lottia gigantea

Domain architecture


Domain assignment details

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Strong hits

Sequence:  jgi|Lotgi1|165708|fgenesh2_pg.C_sca_53000051
Domain Number 1 Region: 343-497
Classification Level Classification E-value
Superfamily Toll/Interleukin receptor TIR domain 5.23e-36
Family Toll/Interleukin receptor TIR domain 0.00013
Further Details:      
 
Domain Number 2 Region: 99-133
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000154
Family EGF-type module 0.021
Further Details:      
 
Weak hits

Sequence:  jgi|Lotgi1|165708|fgenesh2_pg.C_sca_53000051
Domain Number - Region: 54-89
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000307
Family EGF-type module 0.017
Further Details:      
 
Domain Number - Region: 154-187
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000384
Family EGF-type module 0.017
Further Details:      
 
Domain Number - Region: 219-249
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0304
Family EGF-type module 0.028
Further Details:      
 
Domain Number - Region: 252-284
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0594
Family EGF-type module 0.056
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) jgi|Lotgi1|165708|fgenesh2_pg.C_sca_53000051
Sequence length 568
Sequence
MWRRLDKNICYHVPLANGTIYYGVIEAGFNFDFSGNTPPPSNNNCAQITNYCILPTYCLH
NGQCSFNTTLCETNCHCPSPYTGKRCREKLCPDGCGGNTTLCLNGGSCTINKDTCQQQCV
CPEGYTGINCESNIQVTNDTETDQECPMNLCDSFAFCYKGICKQNKRTCAPYCICEDGFT
GSQCETFIDSSDTTTASTPSIPSTSLAPLALRQCASGFTCKHGICDQEKLKENRFKCNCD
KGFIGTTCRKPCRVDCGEYGHCYLDGLKERCACHPDWVGENCTDPKPTPATLIAPANAGW
VWWVAGSCIGLLVLLVFLLIVLPVWLWKRREIFIMKIVHYMQPYEDSDGKMFDAFISYKS
HPDDEGFVLNHVFQKLEKELGFKLCLHFRDFKVGETIANNILWAVENSRRTVLIISPNYL
GSEYAQFEFQTAHLESLSLHSRIVPVIYKDISQHQGSIDATLKHILRTITYLEWPTIEDN
KKETKFWKRLALSLPKRKELDAKSIEAKLSPSKDHSDNHINLLSYKTLNSKSTETMWTDV
SLDETKDTGNYHKNLVSNSGDVSLNMTE
Download sequence
Identical sequences V4A021
XP_009060989.1.39240 jgi|Lotgi1|165708|fgenesh2_pg.C_sca_53000051

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