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  Home > Genomes > Lottia gigantea > jgi|Lotgi1|230169|estExt_fgenesh2_pg.C_sca_110104

Domain assignment for jgi|Lotgi1|230169|estExt_fgenesh2_pg.C_sca_110104 from Lottia gigantea

Domain architecture

Domain assignment details

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Strong hits

Sequence:  jgi|Lotgi1|230169|estExt_fgenesh2_pg.C_sca_110104
Domain Number 1 Region: 34-171
Classification Level Classification E-value
Superfamily C-type lectin-like 4.98e-28
Family C-type lectin domain 0.0014
Further Details:      
 
Domain Number 2 Region: 211-324
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 1.02e-24
Family Spermadhesin, CUB domain 0.0011
Further Details:      
 
Domain Number 3 Region: 2460-2634
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 6.99e-19
Family Laminin G-like module 0.042
Further Details:      
 
Domain Number 4 Region: 438-553
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 0.0000000000000249
Family Spermadhesin, CUB domain 0.0024
Further Details:      
 
Domain Number 5 Region: 343-437
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 0.0000000000000837
Family Spermadhesin, CUB domain 0.0082
Further Details:      
 
Domain Number 6 Region: 618-681
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000000000118
Family Complement control module/SCR domain 0.0016
Further Details:      
 
Domain Number 7 Region: 3472-3626
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000000116
Family Growth factor receptor domain 0.0065
Further Details:      
 
Domain Number 8 Region: 3308-3479
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000000301
Family Growth factor receptor domain 0.0058
Further Details:      
 
Domain Number 9 Region: 164-205
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000942
Family LDL receptor-like module 0.00091
Further Details:      
 
Domain Number 10 Region: 1029-1093
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000347
Family Complement control module/SCR domain 0.0009
Further Details:      
 
Domain Number 11 Region: 2948-3098
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000000173
Family Growth factor receptor domain 0.0048
Further Details:      
 
Domain Number 12 Region: 1805-1843
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000287
Family EGF-type module 0.0071
Further Details:      
 
Domain Number 13 Region: 669-736
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000005
Family Complement control module/SCR domain 0.0022
Further Details:      
 
Domain Number 14 Region: 2246-2289
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000625
Family EGF-type module 0.0083
Further Details:      
 
Domain Number 15 Region: 3667-3828
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000000796
Family Growth factor receptor domain 0.0081
Further Details:      
 
Domain Number 16 Region: 3021-3048,3077-3206
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000137
Family Growth factor receptor domain 0.0087
Further Details:      
 
Domain Number 17 Region: 2371-2408
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000898
Family EGF-type module 0.016
Further Details:      
 
Domain Number 18 Region: 2404-2444
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000141
Family EGF-type module 0.0059
Further Details:      
 
Domain Number 19 Region: 2233-2369
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000116
Family Growth factor receptor domain 0.0094
Further Details:      
 
Domain Number 20 Region: 766-870
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000155
Family Growth factor receptor domain 0.019
Further Details:      
 
Domain Number 21 Region: 1884-1926
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000195
Family EGF-type module 0.0092
Further Details:      
 
Domain Number 22 Region: 732-794
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000222
Family Complement control module/SCR domain 0.0043
Further Details:      
 
Domain Number 23 Region: 3142-3298
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000412
Family Growth factor receptor domain 0.013
Further Details:      
 
Domain Number 24 Region: 2166-2203
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000641
Family EGF-type module 0.0066
Further Details:      
 
Domain Number 25 Region: 1768-1809
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000251
Family EGF-type module 0.015
Further Details:      
 
Domain Number 26 Region: 967-1037
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.0000598
Family Complement control module/SCR domain 0.0077
Further Details:      
 
Domain Number 27 Region: 1847-1883
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000727
Family EGF-type module 0.019
Further Details:      
 
Domain Number 28 Region: 552-628
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000089
Family Complement control module/SCR domain 0.0048
Further Details:      
 
Weak hits

Sequence:  jgi|Lotgi1|230169|estExt_fgenesh2_pg.C_sca_110104
Domain Number - Region: 3861-3898
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000548
Family EGF-type module 0.025
Further Details:      
 
Domain Number - Region: 1479-1588
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0157
Family Growth factor receptor domain 0.011
Further Details:      
 
Domain Number - Region: 2132-2172
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0165
Family EGF-type module 0.039
Further Details:      
 
Domain Number - Region: 3821-3854
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0671
Family EGF-type module 0.035
Further Details:      
 
Domain Number - Region: 1740-1767
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0839
Family EGF-type module 0.041
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) jgi|Lotgi1|230169|estExt_fgenesh2_pg.C_sca_110104
Sequence length 3987
Sequence 
METRVHVSCPYHFIRTIRLNLHVNLSLSEEDYKGQVSLVCPPGWTLSDIKCIKPSPPSVQ
LSWNAALKVCQQDGAHLAEIRDYKSNVELGNFANSQSFSHFWIGLNAPHTNNSVEWSDGS
PTSINEGFWSDQQPDLTKGRCVSYNTVSNENRWSFKNCETKQPFVCQLPACPSGSYHCSN
GKCINNKWTCDGQNDCGDMSDELDCKDKSICSEYQTGTSGQISSPGYPTGSYPNSATCLW
TIESPIGTNVRLQITAFETEIDKDEVTIYGGGKTLTKSQIINRLSGIFVNVPKIFISPNN
YLKVHFNSDNTGVKRGFQASWTVVKQDDESLIATQITQNLAPSSSPQSYLGNQESTWLIQ
SQLSRDVVTLEKMSLDLGEGDVVEVRDGRTVDDVLLATFTHAGGPRYVTSTGNWLMVTFK
TGLTVNNQHTGFQFQYKQGCDYEYRESVGELGWPGHGIVNYPNYQTCTWTIKTSEPSLHL
VFDSDFNLDNSDYLEVYGFQDDSGIALHSGAGYTGTTTPPRIVTTNGAFFLRLKSNAIKS
QKGFKAKYSTDCPTSEFLNFQQAPAPGDTGFGVRTVISCKPGFRFNTQELAGQSEFTLEC
LYSGNWNVRTIPKCEANYCGFPPTVDHGKVISGTGIGFGSTVVYQCTDGFLPATPTTATC
NINGQWQNVPTCREQTCPAPTGNNGLLRQVKTENGDGTTFGSIVQYDCLAGYKIVGVPIS
MCYNGTYTATTPTCEALNCPLPRVANADVRLQGGKPVAVRGDILTMTCKPGFTLSSTTQM
ICGTDQQFTNLASCLDINECNNGSPCGQQQCVNTHGSYHCRCLDGFTSTPTGGCQDIREC
QSSNKGGCSHTCNELEGGYQCSCPLGYFLITRDAEQGYYLPQGETGMNYGDTYYFNHTCL
PGQCAFTSSNGANVTTPSPVKGNDAVQINCPASPGVPAYIKTIPCVYDVSTNSFKLTTQD
FSCKAVSCGMPELVPGHVSPLLISSTKAGVGSFQFQCLQFYQLDGLSDQGDTTVRCLSSG
YWDFGRLRCLPQRCSDPGTPLGGQRISVSYMFNDRATFSCPRSGYQLTNSQPLECQQNGA
TLNWSAALPQCRDVEKPVFVNCTTQPIRLKQYEKISYTIPTATDNNNILLSLTVDKPWFR
PGIPVAESTVVSYTATDHAGNQATCNITVIVQDELSPTIRCPESRRVQIERSSDVVDLSW
GMNDMVKLSDNVAVETLVFTPSSIRLTQSDVGTVQTVTAQASDAAGNMASCQFQISIEGL
CSPNSLSNPINGNKQCTERADGTGYDCTISCKAGFFFQTSYPSELFTTSCNFGGAWTVPD
IPHCTEPQHVSFDLDTEMFYNTSDASVLSSSCINQYNNEIRTRLFDARSHFNTECGITDV
SITVNNNITINYDRQFKVFFRVMFRSTKHIPSVFTNCVQQVTTAIKLIRNDPDASLLSNL
HTIDLVGCSNIVLNTRNSRAKDFCSQPSEVARRVDNIYACVPCPPGTIAEVSICRKCPVN
TYRGGDLQSACTPCPTESATYGDGKTSILDCKPVCSGNLMSTNGLPPCMECTGETYRVNS
TYCQLCPANTKFVPTPLYPECTNPSCTYIKTDNQVMSGPPVNNISPTDGNMQECEASCDS
YRVFGGEECIGFSYNKVTKFCLLLTLEGTLSPNSTYDFYRRSCNYRTDKECYCGDACPIG
SYSFTGNQPDCRLCPQGYYTNTPGSNQCLECPLNQTTTAEGATSCVDGVPLLCGQCSSSN
TESCTVQKHLAYCQCRPGYTGLYCETLINNCLSQPCYYNTQCTNFPGRFDCACPTGLSGD
RCEFNINDCGPTTCQNGGVCEDGINDYICHCLQGYSGKNCQIQDPVCTTRPQCINGGNCI
PVNNVLRRCDCPVGYTGPTCAINSDECASSPCQNGAQCTNRPGGYTCSPCPEGYSGQMCN
IPESQCRNTDCGGGAESCMDDVTTGLPRCICQAGFSYGRYCQYELSTETASTSGNLGQPF
TNVGPSTCMAACESTTNRVNCVGFSYNRNSRSCQLLTQSYTTSTVTNNQLYIKACSHPAD
DFWTPWFNVDKTSSGTETETRVGLQTYDINICSSTTPVAVECRNVNGGSITGSQCSVNGF
QCSTGNCPNVEVRYRCSLSRVFKDTQCKRQDLCSESCDSNHVCHVDRDVVTCKCKTGYKG
LQCSEDINECTDLSIDCNTGQCINTPGSFSCQCQNDFTGSRCQNGPVPCDKNNCNPLNTA
NCINTGTTTSRCECKPGFKGATCGESIDSCDSNPCIHSQRCDNLVNDYTCICEAGWTGRR
CETLIDTCSSTSQSCSDRGTCFSLFNDYYCKCNNSTNYGKTCELTENICSVIDLCYNSAA
CSSGNGETKCNCAPGYMGMSCQIKEDFNCETSSPCVNGGTCSSQVTGFKCSCPPGYGGDK
CEVDVNDCSSNPCSNAAQCVDLIDSYYCQCSNGRASPDCQQNADLNYDVCVGNSINGGAA
MLSFPLSLDASSGLTIAFWVKYDMIGGSGTFLSLSQTLNGDMNSMRATEFFNMDEKNLHV
SLPGQDAEFSYNNMKPNSGRWHAVVLTWRGDNTIQVYIDSLQQLSSSYTPQIQATSRVWV
TVGSMMKTTSMFKGCVSQLNIYDRVLDFSTEMTQLFDTPNFNYPTGVLQGWKDYKTTGDG
VMVRPSRINKQACPENYSGFPSCTTQIVDKKSPEISGCPSNVYTTSINGAGQPSWTEPTY
TGVSSVIFTQRSGSLLSKGRHTVLYEASSSNNNKALCAFTLYINDEFCPALPKPKENGGE
TCSDVGGNWKFKACKIDCQDVNTTNNKIGPNIYTCSPEGDWVWPPSETSYPPCGRIVAEA
NQDITVEVQYPINPTDCSSVQSSLKTRLMEGVNALNTEWQNGLCQQNSCTDVIMNIICNP
GQPTTVNFVLKDVKPELKSASETLKAEEVLAKAVLDQKVLNFDNIVNANVDPHSLLINAR
RVCPAGQTVIDELCVTCTRGTYYDAASMTCMDCPKGQYQDEFGQSVCKQCPSGDTTKDTG
SIAVSQCYDSCPIGQYYSIPNGVCTECTKGQYQNTTGQFECEPCPVGTLTLNTGSTSSSD
CMVGCEAGSRLLPDQTCEKCPIGTYSQEQVCKSCRDGFITPDIGAVSEDNCTVVACPVGQ
YNDNNVCKECPLNQYNDIKWQTSCKDCGARFRTDQVGSTSPTQCIFFCESGYAAGPGNTK
CVICPVGTYKDNNVSPYGACQQCPNSRTTPNNGTTTEAGCSILQCNAGYRADSTNTNCVI
CDYGQYQPNINQLTCFNCTSTQGTRRQGAVQQSECEELCEDGTERVKPGDSCAPCPVGEY
RVKSDVPSNICLRCPEGYVTPGTSSTLQSQCTIRNCTEGYKIENNNCVECPLNTFQPLPY
QTTCQLCPTGKTTISTASRNSSECLPFCVDGQELLSGTCTPCSQGYYKDNAEDKIGMCML
CPQNKTTPTTGARTQTECSLPNCTIGYYIDVPNGKCVACPKGEYQDEKWKFTCKRCPNQS
VTDAEGSTSINQCIYSCFKGYEGSGTSGCKKCGIGSYKPEAGTSLCTACNNGFITKDEGS
ETLDQCNIAACNPGTYLDEVNNVCKQCDYGTYQPERWQKICTSCSAGTVTLQMAAQTAAD
CVTDCPKGSQYNVETRVCDPCPIGYYRDKVSVSQTACQICPAVNVTAGTGAESITDCNVV
NCSIAGFYRNGDKCDVCPRGQYQDEKYQTSCKNCAFGFTTKLIGAPSSQFCYRDCPSGEA
VNEATNICEPCEMGRYRNSSVLDQWTCQLCPANVTTSGLKAKSKSECTVPRCDPGTFVSG
TECKPCPAGTYQSLSVQSRCIPCPDNKITLLDGQTSDANCISLCETGRNNCTQPTTCTDV
PGGFECQCRLPNFGTAKNCSHACDMGYCENGATCRRDSSILCFCAENYRGERCRERVAPS
TASSMTDIIIGVVVGVTAFLLLIIACIICAITRRNRKMRKPIYESYPASTAPPSLYNGSI
SGTNGKAFMPQQDLLTYDPSFYSTGNK
Download sequence
Identical sequences V4BCE9
jgi|Lotgi1|230169|estExt_fgenesh2_pg.C_sca_110104 XP_009045304.1.39240

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.