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Domain assignment for jgi|Lotgi1|230236|estExt_fgenesh2_pg.C_sca_110221 from Lottia gigantea

Domain architecture


Domain assignment details

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Strong hits

Sequence:  jgi|Lotgi1|230236|estExt_fgenesh2_pg.C_sca_110221
Domain Number 1 Region: 505-627
Classification Level Classification E-value
Superfamily Cadherin-like 1.31e-21
Family Cadherin 0.0066
Further Details:      
 
Domain Number 2 Region: 637-731
Classification Level Classification E-value
Superfamily Cadherin-like 5.1e-21
Family Cadherin 0.0049
Further Details:      
 
Domain Number 3 Region: 407-510
Classification Level Classification E-value
Superfamily Cadherin-like 4.45e-20
Family Cadherin 0.002
Further Details:      
 
Domain Number 4 Region: 59-190
Classification Level Classification E-value
Superfamily Cadherin-like 4.58e-19
Family Cadherin 0.004
Further Details:      
 
Domain Number 5 Region: 163-311
Classification Level Classification E-value
Superfamily Cadherin-like 2.88e-18
Family Cadherin 0.0056
Further Details:      
 
Domain Number 6 Region: 749-867
Classification Level Classification E-value
Superfamily Cadherin-like 0.00000000000814
Family Cadherin 0.0061
Further Details:      
 
Domain Number 7 Region: 286-414
Classification Level Classification E-value
Superfamily Cadherin-like 0.0000000000157
Family Cadherin 0.0042
Further Details:      
 
Domain Number 8 Region: 860-974
Classification Level Classification E-value
Superfamily Cadherin-like 0.000000857
Family Cadherin 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) jgi|Lotgi1|230236|estExt_fgenesh2_pg.C_sca_110221
Sequence length 1292
Sequence
MWCVCILFTRPSFFPTAGTYIATLTARDRDPGEEPSVRILYFEVEDKSGNRGTLRADLII
KDVNDESPRFTNLPYRFEVYENETIGSSLFTVTTTDPDDGLGGTATYWLNDSSHLGNPFN
LSGNSIILTSPLNYSINTFFQLKVNARDNMIPFNKADPVDLIVNVLDVQNMPPYFLHQPY
TVSILENTTIGEKTKLKVVALDGDRGVPNDIQYSFVQGEAHNFSINSTTGEISVAGGLDA
DDEAVKQKGGVFRITVNASEVIPNGQINYGQAWSTTDLSITLIDVNDNEPTFTQPLYTAS
IAENSPKGVPLTMSNGQLIEVSDADQTSDHHSFELLMSEDNIYPDAFDTIPGTGTPIYSK
STVILKVNNTVILDYETRTNITFKIRAKELNSIHQTETTIVVQILDVNDNSPVFPDNHTT
QFSVHENTEKGTFIGLMTATDKESDVTYTLDGEDDKFQIGKVTGNLTVNGCLDRELRSSY
TIFVVATDIDSDSSQQRSTRQRINIDILDVNDNTPEFIDIPTRRHIPEDTKPDTELFKIG
ATDKDNGTNQEIEYFLTSNGNITGLDIHIDKGTVFVNQSLIGMVGLRYITVMARDKGQPP
LNDTVQILIIIEDVNLHRPVFYRPSHSEYNVSANLIPEITVEEEQVIGSNILNIYANDSD
SGNNGAISYKLVPDTSDDWQKFSIHRSSGVLTNDGRLDREKQEVYQISITAVDGGIPSLE
STITLKIVLEDIDDNQPVFGEHIQQPHGISVQEEQTDIVVGNLSLATDLDKIPIICYYIL
GGELIDHFFLNKTSGVLSLVKKLDREVTSEVNLVIVARGDCSLTIQPSVSSKGDLVDGHP
PEYVRNNNTMLWVRITVTDINDQPPVFSSKEITSGFLYDIDFGSFIKDLQEEVTDADIGE
NATPYFKLLGPITTKDIDIVDIDIVKTPPLILDINGTIKTNMLFSSDMSGAFIMKVQAYD
IGNLTDEAVIEIYLISDIQRVKMVFLKTPDEVRAVKDVLIQELEKVLEYRIIVDKIATHQ
SSDGSPVTTKSDMFIHARYLDTDKVVPASELWRAFDFSQNINLILDKYGVVQTSPVKAEK
KDETTTEDTLRITLIIVTISLGVIAVILVLFLVSLRSRYRRKLRAATTRTFGGSVKDTIP
DIIPPGTNKYFAAASNPVYMKDVSLNLADDDSTSQNSLDVNEVDGKKKPEMTFEPEEQEI
VMSLYDEHAQELKDSNRNTALDMVLQQYEEKLNLKSREIVVDNGEDDQYDSNLTSVQTLN
KLRSPNVVITGLNVRQTFSEHCSASWVVKCGI
Download sequence
Identical sequences V4B9A9
XP_009045423.1.39240 jgi|Lotgi1|230236|estExt_fgenesh2_pg.C_sca_110221

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