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Domain assignment for jgi|Lotgi1|231837|estExt_fgenesh2_pg.C_sca_230107 from Lottia gigantea

Domain architecture


Domain assignment details

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Strong hits

Sequence:  jgi|Lotgi1|231837|estExt_fgenesh2_pg.C_sca_230107
Domain Number 1 Region: 116-146
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000058
Family EGF-type module 0.021
Further Details:      
 
Domain Number 2 Region: 87-119
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000935
Family EGF-type module 0.02
Further Details:      
 
Weak hits

Sequence:  jgi|Lotgi1|231837|estExt_fgenesh2_pg.C_sca_230107
Domain Number - Region: 53-89
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000319
Family EGF-type module 0.024
Further Details:      
 
Domain Number - Region: 146-174
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00103
Family EGF-type module 0.02
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) jgi|Lotgi1|231837|estExt_fgenesh2_pg.C_sca_230107
Sequence length 238
Sequence
MGSFKVYVSMFVLIAMLKSSSSSRYSSRYGSRSRYNYQPSLSQCLSDLERTLCPKANPCK
NGGTEQSDGTCVCTDKFTGTTCEEKVNPCKNGGIDLPNVGCICTADFTGPTCEERVNPCQ
NNGTLLSDGSCNCTVDFTGTLCEEIVNPCQNNGTLLADGSCNCTVAFGGTFCEIVNPCQN
NGTLLADGSCNCTESFGDTFCGQLRCESDPTEPNFCAPECDPEYLVFGFCDGDDICCL
Download sequence
Identical sequences V4AQZ6
XP_009053221.1.39240 jgi|Lotgi1|231837|estExt_fgenesh2_pg.C_sca_230107

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