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Domain assignment for jgi|Lotgi1|235361|estExt_fgenesh2_pg.C_sca_630093 from Lottia gigantea

Domain architecture


Domain assignment details

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Strong hits

Sequence:  jgi|Lotgi1|235361|estExt_fgenesh2_pg.C_sca_630093
Domain Number 1 Region: 1210-1390
Classification Level Classification E-value
Superfamily RUN domain-like 0.0000000549
Family RUN domain 0.021
Further Details:      
 
Domain Number 2 Region: 1763-1820
Classification Level Classification E-value
Superfamily SH3-domain 0.00000788
Family SH3-domain 0.0062
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) jgi|Lotgi1|235361|estExt_fgenesh2_pg.C_sca_630093
Sequence length 1833
Sequence
MSPTFGSLKTSSNGNTVNNGANITNILQNTDNITNRNYTLVCVEPINKNVIQCTNQIDND
NYNNKATDIMVDSLNEGYQKLETRATLPKVHPKGKKKYSTWKDVSPNSSNENIVGRKMSD
SFGSPKRSRSWDVSQSSSGQTVTWKDLSPSKVKGQVRQKPVRKKRPESGYYSNDVQSEGQ
DSREEFDSLSGSDQMNNGRHSSSSSPDDAGFSEYYYDEDFTVKFDTNIRNSSLKAKEEEE
YAFPPSLTGSYKGFGNLRESLSHPDLYFGNYESELSGSRTSMEVSSSEREMMCSSDMLEF
SNDPLFTPTPTAEIGAQLYSTDSLSQNQSNCCSRTSGDGKLTVDCCPRKDEYFLSFNSSS
QGQSTASLSSNSYASQTSSQDGLATCSPSCSSNEGEEICSNSFHFCQAGQNDGYSNSCNL
KVPSGKSGLDTLEERSIEKSASTEASKSSNGNASQRSPKSSPKSSPKKNSPKSSPTKEGS
KMTPSKGTYGSLDGQQKFCGTDKQQSMKRVKKLTSWKQVKNLKKFGILCTSSDKVHSMPD
LCVQTSWGTGCKQTLEQRGLQEIADSFHNKRHSSSLLELYQRMKSPSSMVSLDTIRAVEQ
ILFPDNSINERFQSEYSGNSSESSFDGSENSCGCPYQEDSRCSSRNSVNSPIRYTTPVNM
YSRSTAISQDKVTLWHGTRNFSSQFPPKTQECGIQACMDGDPIPLNDQSQQTSPSSHNEI
LNILEDIGVDHEPRKPEKEAHQRKAASETRQRSREPKSSRRSSSLSPSRHSQHKFYSHRS
LPDLSFLSPGPRIEHCENSLFDPVKIPIILTPVVDDSQQTQSCQKESGYCSCHKEKRRSG
RYFESGSSSGISTNSTSSCIDGDCYDCRCSQGMAKDLERILFQPPHLECAQKYIPRSDSS
HGTHHHHHHHDRTDHSGHDHHSSFGKRKSSRKMNLSNSSNSSSSLHLDKLYSVKEESPTS
PEKHSHTVFDQGAKLHGHVFRGYHLSGNMEKRYHNREYYEIEDDENSYSIEVQEDISCGR
KPLKSCLRKMDKGCRSRSLSNPDNLNAQLNDSLKMPRKPNRYSIACDSLFPQTTDKETDI
VEVTEDPKEEVPFAAVNPVAEEPEEQAGSQSTSLDDGSKANKRVSFASEVLFQSPQCSPQ
VSPHRLPDSAKVTNIEMEDEELRIEISETVPPEKPKRLFAENPPVEFQISPTLDDKVQQG
SEELMELNRKIALLSNITRAAETLVLHFAQARDPFDKLRLGSVAETPEVGTLVFKELCPA
MEQVIEDGMKPHRTGIHVFGKIHITPWRIAEMSAEVGPYTRSINTLVKQLKTRPNLLSNK
QRFYAFIAGLLNLRLLDFWVGYIQMKDDLKEQVYHPEAILRYSQTKLDKQYNSMILALQP
LSTLPFQLDYDLVAHTPAAAAMLDNSSDGKSEDKTVSEKVGTKSAVPKSVSDSEQLKGSS
KKILDSFGNSLIPKAKSVTSITMNKIQDGPKKLSTFTARKPVAGKAQSQVPVPKTQPKVQ
PTPSRIPVGSSKIPQPSRIPTKPTSTPKVSQIPVMQKSTDSISSTDSKGNKTTWAQQSPT
RSPTRMLFNGEFVEPKEEVKEEVASNTPVVTGLTQKFMENRSLESSAGSVEKGDDSSSSL
SMKALLDSPTKTVTDGNTKKTIDITSLIDKLLLSNKNIQQVKSSEQTLPRAESVSDEVRS
AGFDTKNINKESESVNEIDDAVMDSDEQMKSESHLKAGSSASSFAVIEASPIMRVQLPKP
QPVKGCAQSEMAMKRDDFRLTEFRYGKVLETYDSEDSDYLSYEKGDYLEVLAQLDSTLLY
CAKGSQEGLVQLTAIRPVTDEDEFNIIHNDFYQ
Download sequence
Identical sequences V4BDG7
XP_009062802.1.39240 jgi|Lotgi1|235361|estExt_fgenesh2_pg.C_sca_630093

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