SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSPANP00000016044 from Papio anubis 76

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSPANP00000016044
Domain Number 1 Region: 250-327
Classification Level Classification E-value
Superfamily Intermediate filament protein, coiled coil region 2.79e-22
Family Intermediate filament protein, coiled coil region 0.0000705
Further Details:      
 
Domain Number 2 Region: 23-58
Classification Level Classification E-value
Superfamily Intermediate filament protein, coiled coil region 0.0000000000575
Family Intermediate filament protein, coiled coil region 0.0017
Further Details:      
 
Weak hits

Sequence:  ENSPANP00000016044
Domain Number - Region: 32-110
Classification Level Classification E-value
Superfamily Sec2 N-terminal region 0.00589
Family Sec2 N-terminal region 0.0092
Further Details:      
 
Domain Number - Region: 137-245
Classification Level Classification E-value
Superfamily Apolipoprotein A-I 0.0392
Family Apolipoprotein A-I 0.015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPANP00000016044   Gene: ENSPANG00000007142   Transcript: ENSPANT00000008097
Sequence length 416
Comment pep:novel chromosome:PapAnu2.0:12:9697291:9698550:-1 gene:ENSPANG00000007142 transcript:ENSPANT00000008097 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
LASDGLDLSQAAACTNDYKIIRTNEKEQLQGLNDRFAVFIKKVHHLETQNRALKAEVAAL
RQRHAQPSCVGELFQRELRELRDLRAQLEEDSSARAQAVLERDGLAEEVQLLRTLRRRGC
SEGAVRDMDGATLARLDLEKKLESLLDELAFVHQVHDEEVAELLATLQASSQAAAEVDVA
VAKPDLTSELREIRAQYESLAAKNLRSAEEWYKSKFANLNAQAAHSTEAIRTSGEEIHEY
RRQLQARTSEIEGLRGANESLGRQILELEERHSAGVAGYQGSIGQLENDLRNTKSEMALH
IREYQDLLNVKMALDIEIAAYRKLLEGEETRFSTSGLGISGLNPLPNPSYPLPPRILSST
TSKSHPLGYHLRKRRGRHLRKTSQIEESFEEILEETVISTKKTEKSNIEETTLSSQ
Download sequence
Identical sequences ENSPANP00000016044

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]