SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|330507224|ref|YP_004383652.1| from Methanosaeta concilii GP6

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|330507224|ref|YP_004383652.1|
Domain Number 1 Region: 25-481
Classification Level Classification E-value
Superfamily Type II DNA topoisomerase 1.31e-177
Family Type II DNA topoisomerase 0.00000000015
Further Details:      
 
Domain Number 2 Region: 492-796
Classification Level Classification E-value
Superfamily GyrA/ParC C-terminal domain-like 3.66e-91
Family GyrA/ParC C-terminal domain-like 0.0000147
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|330507224|ref|YP_004383652.1|
Sequence length 797
Comment DNA gyrase subunit A [Methanosaeta concilii GP6]
Sequence
MTEVQVNITEEMKSSYIDYAMSVIVGRALPDVRDGLKPVHRRILYAMYEQGMTHDQPYKK
SARVVGDVMGKYHPHGDAAIYETMVRMAQTFSMRYPLIDGQGNFGSIDGDPAAAMRYTEV
RLSKIAEEMLADIEKNTVDFVPNYDGSLKEPTVLPGKLPNLLLNGSTGIAVGMATNIPPH
NLNELAGAIIHLIDNPQATVGELMHYLPGPDFPTGGYIVGRAGIESAYLTGKGSIIMQAK
SEIEEGAKSTRIIFSELPYQVNKAKLIEDMAEMVKGGRLEGISDLRDESDKEGIRMVVDI
KTGFNANVVLNQLHKHTALQTSYGINNMVLVDGMPRILSLKETLEQYIYYRSIVVERRTR
FELDAAEKRAHILAGLLIALKNIDEVIRIIKAAPTPAEARDGLIEAFLLSEEQAKAILDM
RLQRLTGLEQEKIVSEAAELEKLIAHLRQILSSNLEILSIIKDELTELISKYGDERRTQI
IEADGEVTNEDLIQEEEVAVTITSSGYIKRQPVNTYRMQRRGGRGVIGAETKTEEFVTDV
STASTKDYLLFFTDKGKAHWLKVYEVPALGRAARGKSIVNLLQLEPDERIAGAIPVKSFQ
AGYIVLVTRSGNIVKMPLQAFSNPRKGGIKAVNLKGDSLVSAKLTNGEKELLVATKFGKA
IRFKEGDVRASNRGTMGVKAISLNMGDELISMDVIEPGSGSTLLTVTNQGYGKRTELEEY
PQQRRGGKGVKNIDARKGYVCCTTTVSEEDELLVTTRDGVIIRIPASDIRVQGRSTQGVR
IMNVKPGDEVAAIARIN
Download sequence
Identical sequences F4BZL4
WP_013718883.1.75657 gi|330507224|ref|YP_004383652.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]