SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|55379082|ref|YP_136932.1| from Haloarcula marismortui ATCC 43049

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|55379082|ref|YP_136932.1|
Domain Number 1 Region: 12-263
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 6.27e-70
Family G proteins 0.00000513
Further Details:      
 
Domain Number 2 Region: 464-622
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 1.49e-41
Family Translational machinery components 0.00015
Further Details:      
 
Domain Number 3 Region: 260-379
Classification Level Classification E-value
Superfamily Translation proteins 2.95e-28
Family Elongation factors 0.0019
Further Details:      
 
Domain Number 4 Region: 623-717
Classification Level Classification E-value
Superfamily EF-G C-terminal domain-like 2.11e-21
Family EF-G/eEF-2 domains III and V 0.0018
Further Details:      
 
Domain Number 5 Region: 387-462
Classification Level Classification E-value
Superfamily EF-G C-terminal domain-like 1.65e-18
Family EF-G/eEF-2 domains III and V 0.00033
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|55379082|ref|YP_136932.1|
Sequence length 728
Comment elongation factor EF-2 [Haloarcula marismortui ATCC 43049]
Sequence
MGRRKKIVQECETLMDDPEHIRNIAIAAHVDHGKTTLTDNLLAGAGMISDDTAGEQLAMD
TEEDEQERGITIDAANVSMTHEYEDQNHLINLIDTPGHVDFGGDVTRAMRAVDGALVVVD
AVEGAMPQTETVLRQALREGVKPTLFINKVDRLISELQEGPEEMQKRLLAVIQDVNDLIR
GMTEEMDDIEDWTVSVEEGTVGFGSALYKWGVSMPSMQRTGMDFGEIMELERADNRQELH
ERTPLSDVVLDMVCEHFPNPVDAQPMRVPRIWRGDAESQLADDMRLVNEDGEVVLMVTDI
GVDPHAGEIAAGRVFSGTLEKGQELYVSGTAGKNRIQSVGIYMGGEREEVDRVPAGNIAA
VTGLKDAIAGSTVSSEEMTPFESIEHISEPVITKSVEAQNMDDLPKLIETLQQVAKEDPT
IQVEINEDTGEHLISGQGELHLEVIGQRIERNQGIPINTGEPIVVYREAPQEDSREVEGR
SPNNHNRFYISIEPLGEDIVETIKMGEASMDMPELERREALQEAGMDKDDSQNIEHIHGT
NILLDETKGIQHLNETMELVIEGLEEALDDGPLASEPVQGSLIRLHDARLHEDAIHRGPA
QVIPAVREAVHNSLIDASIKLLEPIQQVRIDVPNDHMGAASGEIQGRRGRVDDMYQEGDL
MVVEGVAPVDEMIGFSSDIRSATEGRASWNTENAGFQVLADNLQPDKISEIRERKGMKQE
LNPAIDYF
Download sequence
Identical sequences M0K5J2 M0K5M9 Q5UZS7
gi|55379082|ref|YP_136932.1| HmR219 WP_004959082.1.69175 WP_004959082.1.84793 WP_004959082.1.89716 272569.rrnAC2413

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]