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Domain assignment for ENSP00000377517 from Homo sapiens 76_38

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSP00000377517
Domain Number 1 Region: 43-249
Classification Level Classification E-value
Superfamily Nicotinic receptor ligand binding domain-like 2.22e-57
Family Nicotinic receptor ligand binding domain-like 0.0028
Further Details:      
 
Domain Number 2 Region: 251-449
Classification Level Classification E-value
Superfamily Neurotransmitter-gated ion-channel transmembrane pore 4.84e-53
Family Neurotransmitter-gated ion-channel transmembrane pore 0.0045
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSP00000377517   Gene: ENSG00000022355   Transcript: ENST00000393943
Sequence length 456
Comment pep:known chromosome:GRCh38:5:161847934:161897666:1 gene:ENSG00000022355 transcript:ENST00000393943 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MRKSPGLSDCLWAWILLLSTLTGRSYGQPSLQDELKDNTTVFTRILDRLLDGYDNRLRPG
LGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTVLRLNNLMASK
IWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHAC
PLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVM
TTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKPKKVKDP
LIKKNNTYAPTATSYTPNLARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSVSKID
RLSRIAFPLLFGIFNLVYWATYLNREPQLKAPTPHQ
Download sequence
Identical sequences A0A2J8NKJ9 H2PHA1 P14867
ENSP00000023897 ENSP00000377517 ENSP00000393097 ENSP00000408041 ENSP00000414232 ENSP00000415441 9598.ENSPTRP00000029894 9600.ENSPPYP00000017921 9606.ENSP00000023897 gi|189083724|ref|NP_001121115.1| gi|189083726|ref|NP_001121116.1| gi|189083728|ref|NP_001121117.1| gi|189083730|ref|NP_001121118.1| gi|189083732|ref|NP_001121119.1| gi|189083734|ref|NP_001121120.1| gi|38327554|ref|NP_000797.2| ENSPPYP00000017921 ENSP00000023897 ENSP00000377517 ENSP00000393097 ENSP00000415441 ENSP00000023897 ENSPTRP00000029894 NP_000797.2.87134 NP_000797.2.92137 NP_001121115.1.87134 NP_001121115.1.92137 NP_001121116.1.87134 NP_001121116.1.92137 NP_001121117.1.87134 NP_001121117.1.92137 NP_001121120.1.87134 NP_001121120.1.92137 XP_001144938.1.37143 XP_003808059.1.60992 XP_003808060.1.60992 XP_009239522.1.23681 XP_009239523.1.23681 XP_009239524.1.23681 XP_009448358.1.37143 XP_018883946.1.27298 XP_018883947.1.27298 XP_518079.1.37143 ENSPTRP00000029894

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