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Domain assignment for vb|PHUM216980-PA|EEB12981.1|ubiquitin-protein from Pediculus humanus corporis

Domain architecture


Domain assignment details

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Strong hits

Sequence:  vb|PHUM216980-PA|EEB12981.1|ubiquitin-protein
Domain Number 1 Region: 244-316
Classification Level Classification E-value
Superfamily ClpS-like 1.94e-16
Family Adaptor protein ClpS (YljA) 0.026
Further Details:      
 
Domain Number 2 Region: 795-877
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 0.00000000571
Family DNA-binding domain from rap30 0.048
Further Details:      
 
Weak hits

Sequence:  vb|PHUM216980-PA|EEB12981.1|ubiquitin-protein
Domain Number - Region: 368-461
Classification Level Classification E-value
Superfamily PH domain-like 0.00185
Family Pleckstrin-homology domain (PH domain) 0.029
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) vb|PHUM216980-PA|EEB12981.1|ubiquitin-protein
Sequence length 1786
Comment ligase E3 component N-recognin-2, putative|DS235172.1:191696:197523:1|gene:PHUM216980
Sequence
MDEKAERSHLSFIDDGEMDIPLAHLPKYTESPKNVIDIWLEKMNKGILTPANFKDHWRIW
VPKFYALEPGSEWNMENDKSNCELIDNLEMFIANGDFQEVMKRINNVNQSSSVCGKVFKI
HEPLYTCRECGMDSTCVLCVTCFKNSAHRNHNYKMASGMGGGCCDCGDVEAWKKDPFCDI
HFTGSQLKNDIQKNFPLDMLERCKITFTGILKYAYQVLTLEHSPGLPHDLRLKEAEQDPF
SFSDSPDVYCTVLYNDEIHTFEQVINSLVKIVKCSQRDATEYVTNIDREGRAVVKCTSFQ
QCQELKTDIERFTSKHGGHPLKVEVVHTHVIAHQVFAMKLLRWLQKTLLTCENFRQIFTQ
VALTPIPPDPSIVEGILLRDSKLWKSARSHWHRLFISGMLMEYNSKKALAKVFTKNYGTV
IKDFINDDHDHSFSIASLSVQIFTTPTLTHHLIAEEEVLFILFHTFMSECSRKFNKNGKL
QFDRNVSNQSFKRAQYILYDLKYLFSSVPTESQWTDNLRRGFLQGFSSFLNLLTCMQGMD
SVTRQVIQHMEFEPVWEAAFQLHIKLSLVITLIIKWCGSDKVVLIKAFRATLNKLNECKL
EGTQTNEVRELADHSATCIQFDVATQPVSIHLPLSRFLAGLYLHLGKYNLTFNSPEFQAT
VKPSPEQIIEPILRTQVMIAQVHSAMWRRNGYSLLNQLYLYHSVRCRTEMLDRDVVMLQM
GATLIQSDEFLIHLLNKFNLLNWADPDFEENSLKNREDDSMHQTISLVEEFLGLLIVILG
ERTVPGVGKVTCDDQIKKQIVQQLCIKPMAHSELNKTLPDDVNLETGLEKVIDEVAVFKK
PVQGSGKGVYELKPELYDQYNMYFYHYTKEELSKSEEEQRKRRKTAKELECCPPPKLPLL
TEAFHTLPNLFQCDVMFYIIQTVLKRCLNLRARSFSEHQLQKVLHLIGYALQEEESKEYP
YLMFAEKSMKWNIEKLLEDLLPSARVEAHRDMLTWTLNKFKQVKATRENVEGSVPMCTST
DVPNESSGKDSKEWRAKMAAEKRAKILAQMAAMQKSFMQENAKLFENTISYPEKSGERVS
MMDYSESDEKDPVALGPNQTSKFLCEKTFTCILCQEDTAVSVEGSALVSPAFIQKSTVHA
NSRVGMEKPDEVLAKPLFLPTNFRPQPHTRICSHVMHSSCWRKYFDIVLAKENRRPYRLR
QPMGFDIEKKEFFCPLCECLSNAVLPILPPLGTIKPTTPISEVTFEEYVEGLMVALKHKS
RQQTSTNSPMNFASDEVEDEYFGNSLLRISLLDKVQSEMGEGSGSRFSELFPQDDPPKLS
QSLVDMILFFANATYAKGLNVIPSINNFFVPIMAWNTCYYTILSTESLLADQDKPLMGAL
SSRQKDCLENLTRFAGVLGVVWEKAYDISNHALFLLSMILKNNSKVLALPCILDWDSFGL
LVPLTLSLPNLFCNNAAGNVPTGGILELYTLKLVFLSHVTKILLITEFGGGEMENDDFEN
TTNLSLHESEIVLGVLSSIKKACNYDLSDVWELNADHVWETVKRASLPFLRCCALFYHFL
TDVPYPVCLTELGGDTYEELCKYLSLPLTVTELFESPKYKDLITIWLTHERVPGCLSSKS
FVSLPKAINGLVNLPRDYSELINMVSTFTCPNSDRDDTRNPTMCLVCGEMLCSQSYCCQQ
ELNNISVGACTFHAHRCGANCGIFLRVRECEILLLATPNRGCFLPAPYLDRYGEADPGLS
RGNPLTLSQEQYKKLRFLWLSHGIYEKIARATDSSNNVVATQWQNL
Download sequence
Identical sequences E0VHX5
XP_002425719.1.24195 vb|PHUM216980-PA|EEB12981.1|ubiquitin-protein 121224.XP_002425719

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