SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for vb|PHUM539800-PA|EEB18927.1|F-box/WD-repeat from Pediculus humanus corporis

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  vb|PHUM539800-PA|EEB18927.1|F-box/WD-repeat
Domain Number 1 Region: 274-601
Classification Level Classification E-value
Superfamily WD40 repeat-like 1.56e-93
Family WD40-repeat 0.0000000000362
Further Details:      
 
Domain Number 2 Region: 172-272
Classification Level Classification E-value
Superfamily F-box domain 7.19e-25
Family F-box domain 0.000015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) vb|PHUM539800-PA|EEB18927.1|F-box/WD-repeat
Sequence length 620
Comment protein, putative|DS235854.1:1079615:1083445:-1|gene:PHUM539800
Sequence
MALPCSSKSITETDSSKNLNNDEDVSEDKRNSDGDEIDSGVREGDGDQNSEGEESWSDSS
SLLVDDEPKPSVLAQKSTCSKPFVQRKRKYDNSTNKPDDSDSSTLCKKINAESKTEGVSS
SGKEKTKTRCIIPTKDNPPPELHDWLVQFQKWTNAERLLGLDQLIELCNPSQVRHIMQVI
EPQFQRDFISLLPKELALHVLSFLEPRDLLRAAQTCQTWRFLAEDNLLWREKCREAGIED
VREYLHRRRQRSGTNVTSSWKAAFMRQHKIEMNWRTRPIRAVKVLKGHDDHVITCLQFSG
NRIVSGSDDNTLKVWSATTGKCLRTLVGHTGGVWSSQMSGNIIVSGSTDRTLKVWNAESG
SCIHTLYGHTSTVRCMHLHQNRVVSGSRDATLRVWNIDTGECLYVLVGHLAAVRCVQYDG
KLVVSGAYDYMVKVWIPEREECLHTLQGHTNRVYSLQFDGVHVVSGSLDTSIRVWEVESG
ACRHTLMGHQSLTSGMELRNNILVSGNADSTVKVWDIVTGQCLQTLSGPNKHQSAVTCLQ
FNKRFVITSSDDGTVKLWDVRTGEFIRNLVALDSGGSGGVVWRIRANETKLVCAVGSRNG
TEETKLLVLDFDVESSKSTS
Download sequence
Identical sequences E0VZX1
XP_002431665.1.24195 121224.XP_002431665 vb|PHUM539800-PA|EEB18927.1|F-box/WD-repeat

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]