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Domain assignment for jgi|Helro1|166651 from Helobdella robusta

Domain architecture


Domain assignment details

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Strong hits

Sequence:  jgi|Helro1|166651
Domain Number 1 Region: 671-928
Classification Level Classification E-value
Superfamily NHL repeat 1.7e-29
Family NHL repeat 0.00000041
Further Details:      
 
Domain Number 2 Region: 190-235
Classification Level Classification E-value
Superfamily RING/U-box 0.00000662
Family RING finger domain, C3HC4 0.018
Further Details:      
 
Weak hits

Sequence:  jgi|Helro1|166651
Domain Number - Region: 322-359
Classification Level Classification E-value
Superfamily B-box zinc-binding domain 0.00058
Family B-box zinc-binding domain 0.0076
Further Details:      
 
Domain Number - Region: 262-309
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.0285
Family PHD domain 0.093
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) jgi|Helro1|166651
Sequence length 1075
Sequence
MKLICNPQYEYEIRSLEDMDLNNQYISSDEISLPAMSRTNSQTPSPTFSFDTITSQNVSA
YEEKKMMQLQLQQQIQPLLPYPYKCEQSQQQQPQQLPLQPDLWYKSGDQQAHLPQLQKYN
YLLEQQPLQTNVTKSVIGQERNTKLSIKPSAKLPKSSANLQQSSANPQGADKSVNYRNDD
SDMDAWLTPLCCLCSKSSENMFLLSCVHIYCIDCIALHITSNSTNFLCVRCGHLQNFSLP
KGKLARDYTAKNSLQLEKSGIVRRSPEIFENDYTVCRLCKTADQLTAPAIAYCQTCQAGI
CDVCVSVHRHMGNFRNHSYELNYKVRPSECSLHKIIMIGYCWNCEVAICNTCYITKCFPD
QHGVTSMVDKKQLTDIKNKLANHVNAAKNLVPFVTEALRNLHHGKNILMLQDQLINVECL
NPLNDQQSLAERKMFNFCNMKQLELKIDELSRDIPIGGRAILYYERLLRLTDDVGLLSAK
TFLEEKLKSFIHAGYSVLENEMHQKNIEIPYILPIPEGANFNADEQSNMLLCEMSQNFKG
LTVNDGVSNLETVKQEKRNFQIKGRSDLYPTQSSINQDANEAPFNQPKSFKQLTTVNQLF
PSKQKILSKPSSQIWKKPEPTSKINDVFSNADQFQIPDEEIPYYAGKKKILVEGDRVYRI
KLAFVNSFGSGQNPFNDPCGICSNKSGNILIADSNNHKINIFTAEGKFIGHIGSEGKKGD
DRLEYPNRVATCPKTNNIVITERKPSNHIKVFTSDGALVKKFAGPNFIQNARSLCVDGDG
NIIVLESKVNRVSIFDKSGEVVNQFSCPQMSFPMSIAVNDQQELFICDNNSHCVMVYTIS
GEFLRKFGNEVVTQYPVSVKVGQNNEIFVFDNHRNFNATVFDRNGTLLAAYEGRHKHAQV
YDVCLNNDGSISFTGKDYMITTYRLPSRHRLYVKKNYEESGASNDMIADSNAAENMPANI
SNCIIANFNVVVNNISAKYYSDSNSQQQPNRFPLLPTPLSSADFNSNAISKNGTLSNIRN
AISNNSNVISNNSDARSNNNVDSERYQSALSDYSLFSTDTGYISARLTPVLFKFI
Download sequence
Identical sequences T1EYB8
XP_009010123.1.102002 jgi|Helro1|166651

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