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Domain assignment for ENSCSAVP00000012456 from Ciona savignyi 69_2.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSCSAVP00000012456
Domain Number 1 Region: 106-294
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 2.1e-47
Family Nuclear receptor ligand-binding domain 0.0000134
Further Details:      
 
Weak hits

Sequence:  ENSCSAVP00000012456
Domain Number - Region: 2-37
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.000153
Family Nuclear receptor 0.0026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCSAVP00000012456   Gene: ENSCSAVG00000007313   Transcript: ENSCSAVT00000012600
Sequence length 296
Comment pep:novel reftig:CSAV2.0:reftig_17:1196036:1201525:-1 gene:ENSCSAVG00000007313 transcript:ENSCSAVT00000012600 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MDMYTRRKCPECRLRKCRAVGMLEECLLTEIQCKSKRRSRKVKTISEDDETMDIVKLTNQ
QSPAPVVKPPPEKDETDRLAALVGKCFSVYRSNPEIVKRWECYYLEQHTKEVPNLCEIAT
AHVQVFVEYTKKLPGFMRLDSHDQIALLKGCVVQAMLLRNSCGYNRINRHLDLKRFVQDT
GLKEDNIRTLTDFFDNVAKLQMDETEYGLLIAIIVFDSDHTDRENQLTIDKYRDRYLAAL
SRYSEAREPRRPQILAKILSLLTEMRTLYHTHVKMVSDWKQREQLTPLLCEIWDMR
Download sequence
Identical sequences H2Z4E4
ENSCSAVP00000012456 51511.ENSCSAVP00000012456 ENSCSAVP00000012456

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