SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for jgi|Capca1|135691|e_gw1.1781.3.1 from Capitella sp. I

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  jgi|Capca1|135691|e_gw1.1781.3.1
Domain Number 1 Region: 76-177
Classification Level Classification E-value
Superfamily SRCR-like 1.31e-33
Family Scavenger receptor cysteine-rich (SRCR) domain 0.00013
Further Details:      
 
Domain Number 2 Region: 1-48
Classification Level Classification E-value
Superfamily SRCR-like 0.0000000000000379
Family Scavenger receptor cysteine-rich (SRCR) domain 0.0013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) jgi|Capca1|135691|e_gw1.1781.3.1
Sequence length 178
Sequence
AYFGEGSGEILMDSIDCDGSEESLTECSHNGWGQHDCSHSEDAGVECFLCLLYFPLKKAE
STEITVSAESFEIPERPVRLVDGNSENQGRIEMFHSGEWGTVCDDGFGLQAALVVCRSMG
YNHGYHYGDARFGEGSGNIWLDGVDCDGDEDSIEQCDHNEWVHHDCNHSKDAGVACCE
Download sequence
Identical sequences R7V737
jgi|Capca1|135691|e_gw1.1781.3.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]