SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for jgi|Capca1|206337|fgenesh1_pg.C_scaffold_18811000001 from Capitella sp. I

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  jgi|Capca1|206337|fgenesh1_pg.C_scaffold_18811000001
Domain Number 1 Region: 19-116
Classification Level Classification E-value
Superfamily SRCR-like 9.02e-26
Family Scavenger receptor cysteine-rich (SRCR) domain 0.00046
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) jgi|Capca1|206337|fgenesh1_pg.C_scaffold_18811000001
Sequence length 117
Sequence
MERKDNNFFLDQCTITQAGLRLAGGSENRGRLEVYHNGEWRTVCDDAFSNADAAVFCRSM
GKPYENAEAIASFGGGSGPIYLDNVNCDRHAYASFCTHRGWGVHDCGHQEDVGLNCQ
Download sequence
Identical sequences R7UXA7
jgi|Capca1|206337|fgenesh1_pg.C_scaffold_18811000001

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]