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Domain assignment for jgi|Capca1|210771|fgenesh1_pg.C_scaffold_4997000001 from Capitella sp. I

Domain architecture


Domain assignment details

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Strong hits

Sequence:  jgi|Capca1|210771|fgenesh1_pg.C_scaffold_4997000001
Domain Number 1 Region: 3-137
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB transmembrane domain 2.35e-25
Family Multidrug efflux transporter AcrB transmembrane domain 0.00048
Further Details:      
 
Domain Number 2 Region: 360-420
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 0.0000144
Family Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 0.01
Further Details:      
 
Weak hits

Sequence:  jgi|Capca1|210771|fgenesh1_pg.C_scaffold_4997000001
Domain Number - Region: 205-251
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 0.00011
Family Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 0.016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) jgi|Capca1|210771|fgenesh1_pg.C_scaffold_4997000001
Sequence length 421
Sequence
MGVRAGLLMGAVLLLTISGTFIVMKVLGIDLEMISLGALIIALGMLVDNAIVVTEGIQVG
LQRGQTRLEAAKRVVTQNQWPLLGATVIAIMAFAPIGLSDDATGEFCLSLFQVLLISLML
SWITAITLTPFFCNILFKKYEKAADNQEGSSVDPYQGALFTLYKQLLNFSLKHRPVTLGL
TLLALVLAMLSFGFVKNVFFPPSNTPIFFVDFWMPEGSDIRATESEIARFEQQVLSMPGV
SNVTSVIGMGAQRFILPYQPEKQYTSYGQLIIEADDLEAISTLIPPLETVLDEQFSDVEY
RIKLMQNGPAAPAEIEARFYGEDPEVLRSLAVQAITVLRNEPTATNIRHGWRNQVSLVRP
HLDEASARRSGISKQALDDALLVNFTGRQVGVYREGSQLMPLIVRSPETERLNADSITDL
Q
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Identical sequences R7U177
jgi|Capca1|210771|fgenesh1_pg.C_scaffold_4997000001

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