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Domain assignment for jgi|Capca1|176435|estExt_Genewise1Plus.C_1450032 from Capitella sp. I

Domain architecture


Domain assignment details

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Strong hits

Sequence:  jgi|Capca1|176435|estExt_Genewise1Plus.C_1450032
Domain Number 1 Region: 340-549
Classification Level Classification E-value
Superfamily DBL homology domain (DH-domain) 1.24e-51
Family DBL homology domain (DH-domain) 0.00021
Further Details:      
 
Domain Number 2 Region: 30-145
Classification Level Classification E-value
Superfamily BRCT domain 2e-19
Family DNA ligase 0.022
Further Details:      
 
Domain Number 3 Region: 166-258
Classification Level Classification E-value
Superfamily BRCT domain 0.0000000000000465
Family DNA topoisomerase II binding protein 1, TopBP1 0.062
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) jgi|Capca1|176435|estExt_Genewise1Plus.C_1450032
Sequence length 862
Sequence
MYNAPIIYSDTGSEFINEASPDTIFVLDNFEGSVFRILHKARCRILGPPAVIHCVQANEP
LPLNSRPLFCQHMDQLVICFTGFKAKEDLSRLADLVHHMGGSLRKDFSCRVTHLVANCTS
GEKYRVAVSMGAPVMTEEWVFKVWDHRDQPEIKATDEHLVGDVMLHKLSPFSFSVLSFQG
FSREEARHMEEVTIENGGSCVEVGAPSCTHLVVDEHAISSRAQLPSDLHPRLHIVKAEWF
WASIQMDACADETMYTMDFVVETPTQNAATKSTPKTLSGSKSRKRKRLRENIAQLASEGE
IDTPMYKRRSSEVARMSFSASFLDATADTSNTPVLSDVKLTPRQQTVMELFQTEKNYVGI
LHTIIKTFKEEIENPDQPGGPLLEPQHIKAIFGGIPPIFDVHVKIRDELGDIIQNWSEEA
LIGNVITKHIDGLIKSYPNFVNYFEQTKETIIKCDRSMPRFHAFLRVCQSKPECGRQTLK
ELLIRPVQRLPSVMLLLKDILKRTEENSADHTKLKEALAKLEEVMTHINEDRRKAEGHHA
MFDIVNDIENCPANLLSAHRSFVTKIDGIELTSELSSRGDHITIFVFSDSLEMCKRRGRI
TSLKSPGAVHVAKTPQKAYRHLTLVPFSGVKRVVDICESTECRNSFALITKMMSEKEERL
YAFSIEDEAVRKDAFLTSLSKAICDHLCRADYETLLTSVAPGVLSIDTNDIGNKTLTRAA
TKFGKRVSRAFSFNKTPRKLKRAMSSMTQIMSPFSRRDSRMFGPSASSTTPRGTNITSMR
LASTNDLTLDENTLCESTYSDLVDQMSLGTPTMQRRRDTSAESDSPLGQLPRTPSVASNM
STLSTVSEMAYPPTMKRGFKYL
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Identical sequences R7V5J4
jgi|Capca1|176435|estExt_Genewise1Plus.C_1450032

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