SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSDORP00000004280 from Dipodomys ordii 69_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSDORP00000004280
Domain Number 1 Region: 528-732
Classification Level Classification E-value
Superfamily Cullin repeat-like 2.14e-61
Family Exocyst complex component 0.00081
Further Details:      
 
Domain Number 2 Region: 86-249
Classification Level Classification E-value
Superfamily Cullin repeat-like 1.31e-31
Family Exocyst complex component 0.012
Further Details:      
 
Weak hits

Sequence:  ENSDORP00000004280
Domain Number - Region: 10-80
Classification Level Classification E-value
Superfamily Tropomyosin 0.0915
Family Tropomyosin 0.013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSDORP00000004280   Gene: ENSDORG00000004568   Transcript: ENSDORT00000004571
Sequence length 735
Comment pep:novel genescaffold:dipOrd1:GeneScaffold_1594:76094:94177:-1 gene:ENSDORG00000004568 transcript:ENSDORT00000004571 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MIPPQEASARRREIEDKLKQEEETLSFIRDSLEKSDQLTKNMVSILSSFESRLMKLENSI
IPVHKQTENLQRLQENVEKTLSCLDHVISYYHVASDTEKIIREGPTGRLEEYLGSMAKIQ
KAVEYFQDNSPDSPELNKVKLLFERGKESLESEFRSLMTRHSKVVSPVLILDLISGDDEL
EVQEEVVLEHLPESALQDVVRISRWLVEYGRNHDFMNVYYQIRSSQLDRSIKGLKEHFRK
SSSSSGVPYSPAIPNKRKDTPTKKPVKRPGTIRKAQNLLKQYSQHGLDGKKGGSNLIPLE
GLLPHTPRGSCPAPWINAACVCAADVSLGHEHDFRVKHLSEALNDKHGPMAGRDDMLDVE
TDAYIHCVSAFVKLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSSSATSYSSEF
SKRLLSTYICKVLGNLQLNLLSKSKVYEDPALSAIFLHNNYNYILKSLEKSELIQLVAVT
QKTAERSYREHIEQQIQTYQRSWLKVTDYISEKNLPVFQSGVKLRDKERQMIKERFKGFN
DGLEELCKIQKAWAIPDTEQRDKIRQVQKNIVKETYGAFLQRYNNVPFTKNPEKYVKYQV
DQVGDMIDRLFDTSA
Download sequence
Identical sequences ENSDORP00000004280 ENSDORP00000004280

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]