SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSDORP00000006865 from Dipodomys ordii 69_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSDORP00000006865
Domain Number 1 Region: 219-284
Classification Level Classification E-value
Superfamily B-box zinc-binding domain 8.09e-17
Family B-box zinc-binding domain 0.0000358
Further Details:      
 
Weak hits

Sequence:  ENSDORP00000006865
Domain Number - Region: 293-368
Classification Level Classification E-value
Superfamily CAPPD, an extracellular domain of amyloid beta A4 protein 0.0693
Family CAPPD, an extracellular domain of amyloid beta A4 protein 0.0081
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSDORP00000006865   Gene: ENSDORG00000007322   Transcript: ENSDORT00000007320
Sequence length 594
Comment pep:novel genescaffold:dipOrd1:GeneScaffold_3142:21197:43556:-1 gene:ENSDORG00000007322 transcript:ENSDORT00000007320 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MEGTDASRSNSSSPDSRDARSPPGPNGTVVENGGGRAEGPEAKPGSSGQGGEAAPGRGAG
SSPRAAESQGALSSGPEWRRPIVQFVESGEDKGPNYFSMDSAEGRRSPYAGLQLGAARKP
VVTFADKAELRKSIFSEPRRLSGPLAEPGEARRGSGQRAELGTPPRAELGGPGAQEVPCD
SCIGHKQRAVKSCLVCQASFCELHLKPHLEGAAFRDHPLLEPIRDFQARRCPFHGKTMEL
FCQTDQTCICYLCMFQEHKNHSTVTVEEAKAEKETELSLQKEQLQLKIIEVEDEAEKWQK
EKDRIKSFTTNEKAILEQNFRDLVRDLEKQKEEVRAALEQREQDAMDQVKVIVDALDERA
KVLHEDKQTREQLHSISDSVLFLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXSHVEKMCKADLSRNFIELNHMENXXXXXXXXXXXXXXXXXWSAPDTMKRYSM
YLSPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNYTSRVWEYSSSIQTSDDHPTVQ
GSSSFSLKGYPSLMRSQVPKAQPQTWKPGKQTLLSHYRPFYVNKGSGTGSNEAP
Download sequence
Identical sequences ENSDORP00000006865 ENSDORP00000006865

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]