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Domain assignment for ENSDORP00000006905 from Dipodomys ordii 69_1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSDORP00000006905
Domain Number 1 Region: 667-750
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.000000000000103
Family Canonical RBD 0.0036
Further Details:      
 
Domain Number 2 Region: 995-1073
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.00000000163
Family Canonical RBD 0.0037
Further Details:      
 
Domain Number 3 Region: 888-970
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.0000000394
Family Canonical RBD 0.0044
Further Details:      
 
Domain Number 4 Region: 1908-1952
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000101
Family HkH motif-containing C2H2 finger 0.041
Further Details:      
 
Weak hits

Sequence:  ENSDORP00000006905
Domain Number - Region: 424-462
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00155
Family Classic zinc finger, C2H2 0.076
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSDORP00000006905   Gene: ENSDORG00000007360   Transcript: ENSDORT00000007362
Sequence length 1960
Comment pep:novel genescaffold:dipOrd1:GeneScaffold_620:2569:71566:1 gene:ENSDORG00000007360 transcript:ENSDORT00000007362 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSRPRFNPRGNFPLQRPRAPNPSGMRPPGPFMRPGSMGLPRFYPAGRARGIPHRFAGHES
YQNMGPQRMNVQVTQHRTDPRLTKEKLDFHEAQQKKGKPHGSRWDDESHISPSVGVKQSS
ITQVTEQSPKVQSRYTKESASSILASFGLSNEDLEELSRYPDEQLTPENMPLILRDIRMR
KMGRRLPNLPSHSRNKEMLGSETVSSNVIDYGHASKYGYTEDPLEVRIYDPEIPTDEVKN
EFRSQQNISSSVPTPNVICNSMFPVEDVFRQMDFPSESSNNQSFFPVESGTKMSGLHISG
QSVLEPVKSISQPISQTGSQTMSQSLIPPSMNQQPFSSEIISAVNQQERITHKPVINSAT
VHVGSRGSKKNYQSETDIPIRSPFGIVKASWLPKFSHADAQKMKRLPTPSMMNDYYAASP
RIFPHLCSLCNVECSHLKDWIQHQNTSTHIESCRQLRQQYPDWNPEILPSRRNEGNRKEN
ETPRRRSHSPSPRHSRRSSSSHRFRRSRSPIRYTYRPRSRSPRACHRFISRYRSRSRSRS
PCRIRNLFRGSPKCYRSVSPERISRRSVRSSERKKALEDVVQRSGHGTELSKQKHLESVD
KGLSPAQKPKSITGTKPSVKSVSAAKSDSNVGHSVRKSKNLEDDILPECKQASSKALSLQ
RKLRKEQSLRNNSVLLISELPEDGCTEEDIRKIFQPFGKVNDVLIVPGKKEAYLEMKFKE
AITAVMKYIETVPLLINGKNVKVCVPGKKKAQNKEMKKKTSDSKKSASALKKDTDSSKSV
ENATSASAKIGQAKTSLPKVNKSSGKSAGSVKSVVTVATKGKASIKTXXXXXXXXXXXXX
XXNVKKDSSKPVTVPANAEMKANVEIKVIDNAEEIISEAALEATENEPVSKETEEICVVL
ISDLPNKGYSVEEIYNLAKPFGGIKDILILSSHKKAYIEINRKSADSMVKFYTCFPMSMD
GNQLSISMAPESMNIKDEXXXXXXXXXXXXXXVDVDKIWSRFVHLDNLPEDGLHCVLCVG
LQFGKVNHHVFMNNKNKAILQLESPESAQSMYSFLKQNPQSIGDRVLTCTLSPKVDSSEQ
TEKDPELKERLDLKNSPVGQSDVQTASASPSVKLNEVEEVTSSSIQTETLGQQEEVVKEE
PEKALCDFDFSLEKLEIETQGELNIEIPLVASTPASIELFTENIEESALNQQVCDNDFEK
QETDITNPETELSVSENKSIEDKNIQRILEESSFAAKGFFFGIKQAVVEDTAEVNKPEMV
SDVVKSTISMPGICTEEEKVVSKKGTSEKSNVDEKEANEFKDKETRVDMQIGSEKAGKNE
ARMVAEKLEKIMAATKEKPEENALIKVCPNKGVGQTNKPDETGKTSMLTVSNVSSTKSTI
KAATMICSRAKTTTTENQKSLIKSVFRGQINAEKKLSPKEFGLFKSARSCWVENSSKFKP
TQSDVTIGGGGRISALQSKDSKLDYKNITMQSQETEGRPSVMKGDDNNNKAFAGQNTKNS
KSTTGRSYKFKEEILFSFNLDEYVTVDEVIEEANPSQAKQNPLKGQRKDTLKTTPSSELN
LKKKKVKPSISPNVEGGLSFVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTTMKRVRIGKAQPSQKVAAAEPAKTEEV
IQISEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDFLVPKAGFFCPICSLFYS
GEKAMTNHCKSIRHKQNTEKFMAKQRKEKEPNEAEERSSR
Download sequence
Identical sequences ENSDORP00000006905 ENSDORP00000006905

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