SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSDORP00000013176 from Dipodomys ordii 69_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSDORP00000013176
Domain Number 1 Region: 6-80
Classification Level Classification E-value
Superfamily RING/U-box 4.48e-21
Family RING finger domain, C3HC4 0.011
Further Details:      
 
Domain Number 2 Region: 91-149
Classification Level Classification E-value
Superfamily B-box zinc-binding domain 3.36e-16
Family B-box zinc-binding domain 0.0013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSDORP00000013176   Gene: ENSDORG00000014016   Transcript: ENSDORT00000014016
Sequence length 378
Comment pep:novel genescaffold:dipOrd1:GeneScaffold_6618:5748:16265:-1 gene:ENSDORG00000014016 transcript:ENSDORT00000014016 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MASQQLTSNLQDEVICSICMDTLQEPVTIDCGHTFCLRCISQVGSSSDELLKCPLCQKFV
QRSTIRPNWLVVNLVERIQAIDPSEIQPEEREMRCPKHGEKIHYFCEQDGEFLCVVCRDS
KDHRSHNPSLIEEAAQKYQGQIQSKLEVLLQKEKEIILEKIKGEQKNDFFLSQVRLEKQR
INQHFRFLRQSLEKEENFFLARLHWLEMEGAKGKLFYSISTQAQLNSLEKLIKSLKNKQQ
MQPRQLLEDIKTLLSRINVFQFLNPTPVPEGLEKKFNEAKSSHNVITENLRKFKXXXQTE
KKIDEARFLKSLDEKDKKSWNMFEKNNPELPSPTMQLNSSTGTMARPSLPGASLAGTVTS
VLLQARSRASYVEVPRDR
Download sequence
Identical sequences ENSDORP00000013176 ENSDORP00000013176

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]