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Domain assignment for ENSDORP00000013225 from Dipodomys ordii 69_1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSDORP00000013225
Domain Number 1 Region: 411-487,536-609,672-891
Classification Level Classification E-value
Superfamily ARM repeat 4.32e-37
Family Plakophilin 1 helical region 0.065
Further Details:      
 
Domain Number 2 Region: 17-131
Classification Level Classification E-value
Superfamily TPR-like 8.44e-25
Family Tetratricopeptide repeat (TPR) 0.0035
Further Details:      
 
Domain Number 3 Region: 152-328,366-496
Classification Level Classification E-value
Superfamily ARM repeat 0.00000000000000446
Family Armadillo repeat 0.022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSDORP00000013225   Gene: ENSDORG00000014066   Transcript: ENSDORT00000014066
Sequence length 943
Comment pep:novel genescaffold:dipOrd1:GeneScaffold_6024:60919:71875:1 gene:ENSDORG00000014066 transcript:ENSDORT00000014066 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MTVSVPGTEPQAASPGASSVEQLRKEGNERFRCGDYEGALSAYTRALGLGAPPAERAVLH
RNRAACHLRLEDFHEAEAEASKAIEKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSL
EPKNRVFQEALRSIGGQIQEKVRYMSSTDAKVEQMFQILLDPEEKGTEKKQKASQNLVVL
AREDAGAEKIFRNNGVPLLQRLLDTGEPDLMLAALRTLVGICSEHQSRTVATLSVLGTRR
LVSILGVENQAVSLAACHLLQVMCDALKEGVKRGFRGKEGAIIVDPARELKVLLSSLLEL
LTEAGVSSQGRDNALTLLIKVVPRKSPKDPNNSLTLWVIDQGLKKVLEVGGSVQDSCEAL
SVAGNSRMSASILLSKLFDDLKCDAERENFHRLCENYIRSWFEGPWPAGKLRAIQTVSCL
LQGPCDAGNRALELSGVMDSVIALCASEREDEQLVAVEALIHAAGKAKRASFITANGVSL
LKDLYKRSQRDSIRIRALVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWLCNDQMDA
GTRRWAAEGLAYLTFDADVKEEFVEDGVALKALFQLSKSEERSVLFAVASALVNCTNSYD
YEEPDPKMVELAKYAKQPVPEQHPKDKPSFVRARVKKLLAAGVVSAMTCMVRAESPALTS
SCRELLCRVFLALVEEVEDRGTVVAQGGGKALLPLALEGTDVGQTKAAQALAKLTITSNP
EMTFPGERIYEVVRPLVSLLHLSCSGLQNFEALMALTNLAGISERLRQKILKEKAVPMIE
GYMFEEHEMIRRAATECMCNLAMSKEVQDLFEAEGNDRLKLLVLYSGEEDELLRRAAAGG
LAMLTSLRPVLCHRVPQVTTHWLEILQALLLSSNQELQHRGAVVVLNMVEASREIASTLM
ESEVLEILSVLAKGEGGPVSRAAAASLGKAMEYGLIQPGRAGE
Download sequence
Identical sequences ENSDORP00000013225 ENSDORP00000013225

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