SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSDORP00000011950 from Dipodomys ordii 69_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSDORP00000011950
Domain Number 1 Region: 282-337
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.27e-20
Family Classic zinc finger, C2H2 0.0069
Further Details:      
 
Weak hits

Sequence:  ENSDORP00000011950
Domain Number - Region: 239-262
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00303
Family Classic zinc finger, C2H2 0.045
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSDORP00000011950   Gene: ENSDORG00000012707   Transcript: ENSDORT00000012707
Sequence length 340
Comment pep:novel scaffold:dipOrd1:scaffold_13197:36655:39600:1 gene:ENSDORG00000012707 transcript:ENSDORT00000012707 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
AAAMQDRELSLAAAHNGFVDSAAAHMGAFKLNPGAHELSPGQSSAFTSQGPGAYPGSAAA
AAAAAALGPHAAHVGSYSGPPFNSTRDFLFRSRGFGDSAPGGGQHGLFGPGAGGLHHAHS
DAQGHLLFPGLPEQHGPHGSQNVLNGQMRLGLPGEVFGRSEQYRQVASPRTDPYSAAQLH
NQYGPMNMNMGMNMAAAAAHHHHHHHHPGAFFRYMRQQCIKQELICKWIDPEQLSNPKKS
CNKTFSTMHELVTHVSVEHVGGPEQSNHVCFWEECPREGKPFKAKYKLVNHIRVHTGEKP
FPCPFPGCGKVFARSENLKIHKRTHTGKKPFQCEVKGCDR
Download sequence
Identical sequences ENSDORP00000011950 ENSDORP00000011950

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]