SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|310640176|ref|YP_003944934.1| from Paenibacillus polymyxa SC2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|310640176|ref|YP_003944934.1|
Domain Number 1 Region: 5-377
Classification Level Classification E-value
Superfamily (Trans)glycosidases 1.73e-74
Family Amylase, catalytic domain 0.0000196
Further Details:      
 
Domain Number 2 Region: 387-596
Classification Level Classification E-value
Superfamily Class I glutamine amidotransferase-like 1.83e-43
Family A4 beta-galactosidase middle domain 0.0092
Further Details:      
 
Weak hits

Sequence:  gi|310640176|ref|YP_003944934.1|
Domain Number - Region: 608-638
Classification Level Classification E-value
Superfamily Hsp33 domain 0.0523
Family Hsp33 domain 0.017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|310640176|ref|YP_003944934.1|
Sequence length 668
Comment glycosyl hydrolase family 42 [Paenibacillus polymyxa SC2]
Sequence
MKKLLYGVAYYDEYMPYDRLDQDIQMMKDAGINVVRIAESTWSTHEPQNGVFDFTSVDRV
LDAMHKAGIEVIVGTPTYAVPTWLVKEHPDVLATTPQGPGKYGARQIMDITNPVYLFHAE
RIIRKLIGRVSQHPAVIGFQTDNETKHYHTSGPNVQLQFVKYLRERFESLEELNRKFGLD
YWSNRINSWEDFPSVVGTINGSLGAAFSQFQRKLVTDFLAWQVAIVNEYKREDQFVTQNF
DFEWRGHSFGVQPDVDHFAASEAFDVTGVDIYHPSQDDLTGIEISFGGDVARSTKHNNYL
VLETEAQAFTHWVPYPGQLRLQAFSHLASGANMVAYWHWHSIHNSFETYWKGLLSHDFEP
NPVYEEAQTIGKDFARLSTHLVNLKKKNKTAILVSNEALTSINWFKFNMNSPLNYNDIVR
RLYDELYKLNIGTDIVHPGTESFDDYDLLIVPSLYSAPDALLEKLNRYVEQGGHVVYTSR
SGFTDEHVQVRTSQQPGVISEACGIHYSLFVEPKNVTLKDNPFKVAEDDNQVDTWMELIT
PTTAEVLAYYDHPHWGKYAAITQNRYGQGTATYIGCIVSSAVIRELFSSVAKKAGVWGLD
QEASYPIIVKSGTNDLGRTIRYYFNYSEQAGSVVYPHGDGKELIGEQSVTHGQLLQLKPW
SVIIIEEA
Download sequence
Identical sequences E3EI25
gi|310640176|ref|YP_003944934.1| WP_013369329.1.14980 WP_013369329.1.91857 gi|386039350|ref|YP_005958304.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]