SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|310640251|ref|YP_003945009.1| from Paenibacillus polymyxa SC2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|310640251|ref|YP_003945009.1|
Domain Number 1 Region: 325-665
Classification Level Classification E-value
Superfamily (Trans)glycosidases 7.81e-112
Family YicI catalytic domain-like 0.0091
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|310640251|ref|YP_003945009.1|
Sequence length 731
Comment alpha-galactosidase [Paenibacillus polymyxa SC2]
Sequence
MAIIIDKEKLLFHLQGSNTSYVTQVIQDGYLVHLYWGKKIQNYRGSNKIIFMDRGFSPNP
DGADRAFSLDTIPQEYPSFGNSDFRIPAYQLQLENGSTVTDFRYKEHRVYQGKAKLKGLP
STYAEDDGEVETLEIILEDPLIDVKIVLSYSLYPKRDVITRYVRFDNEGQQQLKLLRALS
ASVDFRDDEYELITLYGAHNNEKNIARRKILPGIQMVDSCRGASSPHQAPFMALVREGTD
EDQGEVYAFNLVYSGNFTAQTQVDSYRNTRVTMGINPFDFTWLLGPEESFQTPEVVMVYT
ENGLGGMSRIYHDLYRNRLCRGPFRDKERPILINNWEATYFNFDADKIEQLAKEAQSVGV
ELFVLDDGWFGKRDDDNTSLGDWVVDRRKLPDGLPDLANRIRNLGMEFGLWFEPEMVSID
SDLYRKHPDWCIHVPDRPYTLGRNQLMLDLSRKEVCEYIVKSVSDILSNVPITYVKWDMN
RHMTDVGSAALPPERQRETAHRYILGLYSIMEELTSKFPHVLFESCSSGGGRFDAGMLYY
MPQTWTSDNTDAICRLKIQWGTSLVYPPITMGAHVSTVPNHQVGRITPLETRGYVAMAGN
LGYELDLTTLTVEEKEVVEKQIALYKEMRSLIQFGNFYRIINPFDENEAAWSFVSEDQTE
MAASYFKVLSQPAAAIKTLKFKGLNPDYIYRNIETGELFGGDELMHVGITLTRVKQDFLG
LFWRFVKEDII
Download sequence
Identical sequences E3ECJ6
gi|310640251|ref|YP_003945009.1| WP_013369404.1.14980 WP_013369404.1.6267

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]