SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|310642871|ref|YP_003947629.1| from Paenibacillus polymyxa SC2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|310642871|ref|YP_003947629.1|
Domain Number 1 Region: 3-307
Classification Level Classification E-value
Superfamily Arabinanase/levansucrase/invertase 3e-93
Family alpha-L-arabinanase-like 0.00000000956
Further Details:      
 
Domain Number 2 Region: 323-517
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.19e-47
Family Beta-D-xylosidase C-terminal domain-like 0.0000206
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|310642871|ref|YP_003947629.1|
Sequence length 525
Comment glycosyl hydrolase family protein [Paenibacillus polymyxa SC2]
Sequence
MMIQNPILKGFNPDPCITRVEDTYYIVVSSFEWLPGVRVYQSKDLAHWEHCTDILTDQVD
LRGNPKNCSIWAPQLSYADNLFYLLYTDVKSTKRPFKDVHNFVITAPTIHGPWSEPVYLN
SSGFDPSLFHDEDGRKWLLNALWDYRMLESNKSSGIVMQEYDSSQQRLVGEPVKIFDCTP
LKKTEAPHIYRQNGYYYLITAEGGTGTGHAVTVARSKQISGPYEVDPHNPMLTSRDQLNF
PLQCAGHGSLVQTPDGEWYMAHLCTRPVEGKYAILGRETALQQVYWNDEGWLRLTAGGHT
PQLEVPAPQGTVSIKQEQQEYIFEDFFEGPTIDKSWNTLRILADDSWCSLSQRPGYLRIH
AGESIQSLFKHHMLAIRQTDHHFRVETALEYQPTSYLQMAGLLLYLNEEDYLYTYVSYEE
GVGKVLRMMRCEANSFTLVPQVIALQNDLPVHLAVEVHASYAQFYYGVGDEPSWKRLFEI
QDISFLSGGFTGNFVGIAAHDMQQFQGSYADFSHFLYYGKDHLSS
Download sequence
Identical sequences E3E9B5
gi|310642871|ref|YP_003947629.1| gi|507716205|ref|YP_008048814.1| WP_013371974.1.13814 WP_013371974.1.14980 WP_013371974.1.57060 WP_013371974.1.91857

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]