SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|310641393|ref|YP_003946151.1| from Paenibacillus polymyxa SC2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|310641393|ref|YP_003946151.1|
Domain Number 1 Region: 71-290
Classification Level Classification E-value
Superfamily Glycoside hydrolase/deacetylase 5.11e-66
Family Divergent polysaccharide deacetylase 0.00000804
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|310641393|ref|YP_003946151.1|
Sequence length 311
Comment hypothetical protein [Paenibacillus polymyxa SC2]
Sequence
MSTRRKLHMRNIIKKALKASRNRKNSSYALVHHARSRMQIIVVLCISVCMLFMVCKTAVA
EAIDQQNQQQKRVAVIIDDLGNNMKGTKEILNLPVKITVAVMPFLPTTKQDAMEAHNRGH
DVIVHLPMEPKQGKPEWLGPGAIKANMTDEEVRAKVTAAIKDVPYAIGMNNHMGSKVTSD
KRIMSIVLDVCKEHGLFFVDSRTNYWSVVPELAAKKGMPPVRNDVFLDDVHTLAHVNRQL
SKVVEWLAEHNTCVTIGHVGVSGMYTSSGLHSSVPKLKEHAQFVGISDLVRDVWGWTGDP
ATNTTTPSDGQ
Download sequence
Identical sequences E3EHB9
WP_013370527.1.14980 WP_013370527.1.91857 gi|310641393|ref|YP_003946151.1| gi|386040431|ref|YP_005959385.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]