SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Home > Genomes > Paenibacillus polymyxa SC2 > gi|310641823|ref|YP_003946581.1|

Domain assignment for gi|310641823|ref|YP_003946581.1| from Paenibacillus polymyxa SC2

(show help)
Strong hits

Weak hits

Sequence:	gi\|310641823\|ref\|YP_003946581.1\|
Domain Number -	Region: 627-696
Classification Level	Classification	E-value
Superfamily	Invasin/intimin cell-adhesion fragments	0.00149
Family	Invasin/intimin cell-adhesion fragments	0.007
Further Details:

Domain Number -	Region: 539-599
Classification Level	Classification	E-value
Superfamily	Invasin/intimin cell-adhesion fragments	0.00196
Family	Invasin/intimin cell-adhesion fragments	0.0053
Further Details:

Domain Number -	Region: 844-895
Classification Level	Classification	E-value
Superfamily	Invasin/intimin cell-adhesion fragments	0.00424
Family	Invasin/intimin cell-adhesion fragments	0.01
Further Details:

Domain Number -	Region: 425-511
Classification Level	Classification	E-value
Superfamily	Cadherin-like	0.00785
Family	Cadherin	0.065
Further Details:

Domain Number -	Region: 754-795
Classification Level	Classification	E-value
Superfamily	Invasin/intimin cell-adhesion fragments	0.00863
Family	Invasin/intimin cell-adhesion fragments	0.0085
Further Details:

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by

Molecular Function	IC (bits)	H-Score

Cellular Component	IC (bits)	H-Score

Biological Process	IC (bits)	H-Score

External link(s)	gi\|310641823\|ref\|YP_003946581.1\|
Sequence length	1156
Comment	rtx toxins and like ca2+-binding protein [Paenibacillus polymyxa SC2]
Sequence	MKVYSLKWAAALVALQATFGTSAHAATPANNSFSDISYVTNDKMVAIQEAVRQGLLSGDP QGTFRPAATLTRQELAVLLVRALKLDPISSSSTFKDVQSKQFAAPYIEAAQKAGLLSGDG LGNFRPNDSVTREELAAVFVRAVGGVNAEGGSSILPKDQSSVSQWAAGAVDKALRLGLID IHDSRLNPTGEVKREDIAPFLLDIFKTQEQTATINSVDGDIVTIDNVPYLIEGKLKELIG NSNKDALKGAILKFNSRNRNVDGLQQLEIVQKDVVLNTNGLPESSLLRISGDGVQIKGDT KGIIELKNGVSNIQLNGNVNHLTVNSGSDISIKGTGTIGELKVANANAKVTLNPNFKVET IKLPKDISVSQVIQNYNEVQKQIGQIQSADGTVQKTTTVTSSSVTFSSGGGTSTNSVTNH APGVTTGFTDITLSTADEPKKINLANSFTDVDGDTLTYTAESSVTNVATVSVNGSQLILT PVSAGTTKITVTANDGKGGTINSQFNVTITPVIPEAVNHAPTVETSISNVTAGVADGIKT VSLAGVFANEDSDVLTYTATSTNAGVATVAVNGSDLKITPVNAGTTTITVTANDGKGGTV DTQFNVTITPVIPEVVNHAPTVETSISNVTTGVADGIKTVSLAGVFADEDSDALTYTATS TNAGVATVAVNGGDLKITPVNAGVATITVTTNDGKGGMVHTQFNVTITPVIPEAVNHAPT VETSISNATAGVADGIKTVSLAGVFADEDSDVLTYTATSTNAGVATVAVNGSDLKITPVN AGAATITVTADDGNGGTVDTQFNVTITPMIPEAVNHAPIVETSISNVTTGVADGIKTVSL AGVFADEDSDALTFTATSTDAGIATVAVNGSDLKITPVNAGTAMITVTANDGKGGTVDTN FTLTLTPLPAVNHAPVVQSTINDISTEAGAMDTTIGLASTFADEDLDLLTYSAGSSDPSV ATVSVTGDQLSITPLAVGSATVTATADDGKGGTVQTIFQVTVGEKRGLFFSELAWGEGDP MMQIIELYNAGSEELDASKIRIERSDSGNSIEISQNAGASIPGGATFVIGDTMYFGDAHV DYFMDMGFYNDDSTPVTLSLYYDNQLIDTAVFQPHTTIARQSDVTHGNAGHYEASEWFDE GIDYTDNIGIFNSEAP
Download sequence
Identical sequences	gi\|310641823\|ref\|YP_003946581.1\|

SEARCH