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Domain assignment for JGI_V11_145369 from Bigelowiella natans CCMP2755 22

Domain architecture


Domain assignment details

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Strong hits

Sequence:  JGI_V11_145369
Domain Number 1 Region: 45-115
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.00000000000000588
Family ABC transporter ATPase domain-like 0.0026
Further Details:      
 
Domain Number 2 Region: 189-258
Classification Level Classification E-value
Superfamily RING/U-box 0.00000000454
Family RING finger domain, C3HC4 0.011
Further Details:      
 
Weak hits

Sequence:  JGI_V11_145369
Domain Number - Region: 319-536
Classification Level Classification E-value
Superfamily Bacterial hemolysins 0.000759
Family HBL-like 0.068
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) JGI_V11_145369
Sequence length 568
Comment pep:novel supercontig:GCA_000320545.1:scaffold_98:142552:146342:1 gene:aug1.98_g20077 transcript:JGI_V11_145369 description:""
Sequence
MTDTSRDAEIMSLLLNKVGLGKHLKKSCTHEEDGRFSTPSPLNVAHHDWADVLSGGEKQR
VGWARLFFHKPKFAILDEATAAINPDEESKLYEELAKLDVTFFSIAHRLNLRRFHQKELN
LAGDGTGAYSLKEISTSKSKQYTFDSRNIWEYFPKNLPKTFFRRRKWTAFARAETAEPIS
SEIIYNNDLKECCICKEESCNKFMKTQCGHVFGKVRIHRCIAEKIKKGHNPECPICRSTI
DSKNLKPISQLATSIQSMKSNLDTDKCSTEKDSRLCGTKRISNVFHKVGTLLEWRDKYGN
YLKGAIEFISHVLVPEMKDIDSFPEELKQHAENLRETLERYDEGLTNSRMNLHEFDEAID
LSMQNIEKGKLTKTQFANEILRQCVENCETQSKDLFGIISKLEKNNDALQATRKSVSTKY
DELKRRKGINAAFLAGGAVVTTASVVLTVIPMVNFVAAPAAVAGAGGVGTAYQAFRYLTI
YQRLMSQLKEVHKNLKSLIGIVQSRRKTIESLRRKFQIILRGMGGVEERVKSNSPDIFFN
RQLNKVSSLIQATLNEMTREKKRPENCK
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Identical sequences JGI_V11_145369

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