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Domain assignment for JGI_V11_80042 from Bigelowiella natans CCMP2755 22

Domain architecture


Domain assignment details

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Strong hits

Sequence:  JGI_V11_80042
Domain Number 1 Region: 462-723
Classification Level Classification E-value
Superfamily RCC1/BLIP-II 5.62e-57
Family Regulator of chromosome condensation RCC1 0.011
Further Details:      
 
Domain Number 2 Region: 680-844
Classification Level Classification E-value
Superfamily RCC1/BLIP-II 2.09e-29
Family beta-lactamase inhibitor protein-II, BLIP-II 0.046
Further Details:      
 
Domain Number 3 Region: 69-198
Classification Level Classification E-value
Superfamily PH domain-like 1e-20
Family Pleckstrin-homology domain (PH domain) 0.0076
Further Details:      
 
Domain Number 4 Region: 328-431
Classification Level Classification E-value
Superfamily PH domain-like 0.00000000116
Family Pleckstrin-homology domain (PH domain) 0.02
Further Details:      
 
Domain Number 5 Region: 931-962
Classification Level Classification E-value
Superfamily WW domain 0.000000043
Family WW domain 0.0017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) JGI_V11_80042
Sequence length 975
Comment pep:novel supercontig:GCA_000320545.1:scaffold_67:223795:228030:1 gene:fgenesh1_pg.67__51 transcript:JGI_V11_80042 description:""
Sequence
MSRSQMRKVRLLRLLRRWAALGFIDAKRISRGPREMIVFQFAVEFFGKTENERKRMVFQI
CDNLRKGESERLWAKADSTQATQKATVAKFTILYLKITRQGLMKKAPSAKEKDEVRKGKW
QERWFVLKKTTLFYYKKRGDSRPKGEIDLRAALIEDADVKTRKEFTIRIHQATQIFNYLQ
CSSQAEKDAWLDDIKTAAGYKEVQVDEQVRANEYFASFGVLKQGIDGNLRRVVLIPDEKK
QLVHVAFEQQFVKRYSTGMVRKAVASKDVTVSNFFEVRLVLCPDPRLPNDLKEKVFYVAS
RDEAHACASLLNNFCQGDRSKIQDLSNAGPKQKGFLEMQGLAERAWVRLWAVLTEKRCLL
YNSVDDTIPVWVVWISEKPTREGRCGLSFKDPHQVWNFRFEDPAERDDWAKAFESVSRSF
EQQLTAQLDNIEIDTRVQGDPEMQKAVNEDMVRSSKKILDSSSSYVVTWGQGRGGQLGNG
LSQGTSYPQLARLLADKKVRAVCAGAAFGCAITRHGQCYAWGSGKHGELGLGEHTLKKNY
PCLVVSLRSTSVNSVSCGRAHVLALTGNGQIFSWGGGDRGQLGHGGTANQYKPKILSFFR
DLKMGSGSKSEAATVIQISAGGKHSAALLEGHTQCYVWGDNSHGQLGVAADLGERVLRPV
PVRMFSGQGTEGGTRSCAVVDCGEHTTAFLATSGELFMCGSNSHGQLGLGDTNDRSKPTL
IDSSNFGSGTLGQVRQISCGAHHTLAVAGGQLFAWGAATLNGRSRGSTTPGKPLANAKFI
SASATHSCFIDMKYNVIAFGTNEHGELGVDESVESRGMVESNLDDPLECFSVSCGDHFSI
ALMEGKRPDKLHREREKDQKAAEEYANMQAAELLHAMEQPQQATTTSSTSQSSTNAGQAP
VASTTTTSGPAAEKHKTAPSAQKKQPQSSQKQGVWKEVMDPKSGRPYYYHTITRETRWKR
PTDGLPIVKKHMPRQ
Download sequence
Identical sequences JGI_V11_80042

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