SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for jgi|Pospl1|107000|estExt_fgenesh3_pm.C_1810001 from Postia placenta

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  jgi|Pospl1|107000|estExt_fgenesh3_pm.C_1810001
Domain Number 1 Region: 304-403
Classification Level Classification E-value
Superfamily EF-hand 2.91e-26
Family Eps15 homology domain (EH domain) 0.00049
Further Details:      
 
Domain Number 2 Region: 115-215
Classification Level Classification E-value
Superfamily EF-hand 7.21e-20
Family Eps15 homology domain (EH domain) 0.0016
Further Details:      
 
Domain Number 3 Region: 4-96
Classification Level Classification E-value
Superfamily EF-hand 0.00000000000000605
Family Eps15 homology domain (EH domain) 0.0036
Further Details:      
 
Domain Number 4 Region: 1195-1244
Classification Level Classification E-value
Superfamily UBA-like 0.0000000217
Family UBA domain 0.013
Further Details:      
 
Weak hits

Sequence:  jgi|Pospl1|107000|estExt_fgenesh3_pm.C_1810001
Domain Number - Region: 491-673
Classification Level Classification E-value
Superfamily Tropomyosin 0.0981
Family Tropomyosin 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) jgi|Pospl1|107000|estExt_fgenesh3_pm.C_1810001
Sequence length 1246
Sequence
MSKFTPSPAEVHLVNQIFAQADTQKLGVITGDAAVKIFSGSKLSPTVLADIWNLADEDNN
GVLTRKGVAVAVRLLGHAQRGEQITEALVNRPCPPPAIEGLTPPLVPQSTGIPSAKSPPP
GFPPLTAQDKGKFMKLFVGYGPTNGVLAGDKARDVFVKSKLPVDKLSQIWNLADTKNRGA
LDATDFTIAMYLIQACMSGQVHTLPATLPPGLYEQAGGKGPFDGVAVHTTGGSSTYSPSL
NSSFPRPVSMLEPQYTGQGSPLQPQMTGPMRSTPTAPSLPPRSALSNAATASAFPFLQQQ
TTGATQQPWDVTPAEKASADRLFEGLDTQKRGYIEGDIAVPFMLLSKLPEDVLAHVWDLA
DLNNDGRLTRDGFAVAMHLIQSRLNGKEVPASIPLTLIPPSMRGAAPGQAPPPQPSVQDS
IRDLIWDDSPPASATMPPPQQPALQPQATGTLSSRTPIASPPMRSQTISDPCRDDDEPAQ
TASPPLHDQSAEIGNVKNQLNSTNRSLEVAKAEREDMERKLSEQASQLAALQTQLSSAKA
AYETETRLLSALRERYNAQTMEMQQARENLIRGESDLSAVRVEKAEIEGSFLRDKEDVRE
LQRKMTEVYMEVETLKAGVEKAKKEAKQQKGLLAIARKQLATREAERAKIQKELEEAHIE
LTDVTKELEEVQAKAAEEVPAPMTNGHGVASPDILARALAQPLPATPDIPTSPTGSVMSL
GKSNNPFERVAMASGPGSRSQSPFLPFTNSAMLPTPPTAGGNASKEAEESTPVVAASPNP
FRFSQAFSPEQAFSSLEAPAEAQLGVSPIDLMSPTDTDMFHTPPSSATLTALSPMPQPLH
EGADLEAPASTDTIVPTGTPANVNDQQQDTDLGHQLKELEVEESDSDSDSESSDDEPLAT
IKAPTGPEPTIAEQSDAAGTSSVPEISAFDDSFGITTEDTRPLSSFLPAAATPVRTFGTP
LAPTTAPVAPAPSASVDTAQKTNGFVAETPGVDDFDEAMGKISAVSSTNGGQSQPTQFDF
GSAFDDNFDFAAATAPAVNAAQPPAPAVRPQTTGTQGPSPLTMPLVQQAPNPTRAQVSQV
QAILPTAFPLTTLLAQAPPPAQPRTSAAFPTTSPPLSPVRAASPPLDARRSSSPARRMSP
PPRHSSPKPRPSTASSDKEKAPSHRTSKLSIRLPFGRKKKTHDIPPVPPPLTSQHLVEEP
TPSADDDLPAVKQLCGMGFSRTQAVTALELHDYDLQRALNSLLGSS
Download sequence
Identical sequences 104341.JGI107000 jgi|Pospl1|107000|estExt_fgenesh3_pm.C_1810001

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]