SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for psu|LbrM34_V2.0570 from Leishmania braziliensis MHOM/BR/75/M2904 2.4

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  psu|LbrM34_V2.0570
Domain Number 1 Region: 55-167,465-508,711-736,1029-1103,1135-1187
Classification Level Classification E-value
Superfamily WD40 repeat-like 2.88e-24
Family WD40-repeat 0.019
Further Details:      
 
Domain Number 2 Region: 388-422,455-527,587-608,669-707
Classification Level Classification E-value
Superfamily WD40 repeat-like 0.00000000000426
Family WD40-repeat 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) psu|LbrM34_V2.0570
Sequence length 2117
Comment | organism=Leishmania_braziliensis | product=hypothetical protein, conserved | location=Lbr.chr34:219014-225367(+) | length=2117
Sequence
MHPTQSGMLATSPPTPESPLETSTPDRRGPAPFRLEEAPVYRDAWARQHPSIHLLFHRDI
ITHLVWCAAACRYLTGGADGAVKLWRSELQPRASSSHATSSSCAEHPVLIPEAHVITLGG
PVTGLCASGQAVGNSEVAVVASTDGTLTLCRTGTHEIIRTLRGARGESLEPSRQIAPPQC
GPALSGLGKDHVSEEGDSGALARGDQQLTHRYFKGPTWYAAEAYSCRLAPSSDMAIVRRP
VYTVRAYRNEAREALTSSSNEYFQGLRTVAPTYEHLTQHEEKNADVLAQFSVAPAPPTST
PNSTMPRQWYASAIALAAAPAVIYTSNVSGGGGALSSHSALDPLLLLGFPKGLVQAYVLP
QRWFSLHQHGETRLDPPAVRVPVFSGLLHSATVLGIEVLVGRDMVVSVSEDCTTQLRRLS
CLHAPLRQLGVVVSLPTPVSHVPPSPLKSLSSRAPSLWQHVGSADGHSRPVTCCCVDEEH
QLLITGSADHTLCWWNLMAGSSSIPIRVVTLRDTATAADLRSGADGTPSSPSNPPALVVR
GGYPVDVSLFRRRLLDERSKDASPAVVTADDASGRSSLGRSFQMALFLLVLDTERVVRIF
DALSGKLIASEIEPRTAATATASGVVDKLNSVTKEARLARYDCVNGTDRVLLGGLYLVPW
YLARSVDSAVMRGHTASIFFTAWCASLKCAVTADAHHVLFWRLRAGQKGDPTAEVLRAWR
ITAGIRSVALCDTEATDEHSHLQRPSLFIAHESEAVIGQYDCLLSDSSPAHGTSGLPQPH
LLQRLSLHDSVSVNALAAVTAVARRSSATQGVSSAEVVTAYALAVGHATRGTGGETLHGA
SGESRLLMYPLLLSSATTVSASTQATATIDGAAGPIAPLRELRLSGSHADGNNSIVSVLG
LPCANLVVVGGRRVLYTAPLSSMATSAVPCDPLPLGRAAAAQPRWRGSNLSMRAPQPTAV
FPGPLISLDDSTTLSMANGEAAEQADGDAMVAVALADSLLTGFLSRLVHIPHDTAASAPD
SGEAAVCLVLSGSNDGLVQLWDVHHGRELWQCRAVMTREPITALAVHHCDTQWLVAAGDQ
SGVLTLLDITSVVQAARQVVAADAQGPRKPGARTTGWPQHGLEREEGRMLDRWLAHADAV
SGAFFTTVPAGVSDEAATALQLLTTGEDSAVMLWTLPSCSLLSTSPITPNYELSGILLLR
PCERADATNHRRSHAPVRVQPSIMKLPWAARQAYEALRQQYVRERLLDGKSTELSAALMR
FYMPAKPLEGTTAGESANVEPGEEESEEEVKLIDRAWAVLTADVRAFSRSVVPAEPQGDA
LAVAPRPLTVVQAWCKSLSPDVTAKHTATAFSSNLPATKIQPHCDKNVIKTSCKSVTPST
VPSSAAGRPALPPSPLILAFADRCCDGHGRGGCSSARQRSTSEFVARASSVRECLRQTLR
VVVQSSVENASSQRALGTAMATQRRHSIALGPSLLPSVADPFEFADKTLPLPGKPSLVSD
ETPNCIEGANSEVPRTPPACALISTSPGGLSHGGTPNSLTQQVANHGATPRRYVGFTGEG
GEPRSAPCTVPAAPLQSQSSRMVVTYRVGYSVHAPLVRSTSADRCAGASAKHGRLLRKTT
PEDARDTAMNEFATAPRLSERHFVDDDAGLNATVDAPYGGLAGGDTAAIVMQHANRHRRR
AEALQCLIMLEQADLNLCCRGTARKGTADGKRKLAGDAVGRPVLRGGGTVALGLPQCSVR
RASATARQWERSLKKKQPKTCTGGSSQRSGSPQAAVVSPPKVPLVLVSDAYLKPVLTRVG
ASSALLSDYAAAARTTTANRTALSLESASVYDSAWYAERQRRRDAAREKARLWNSHRVMK
TLLGWTASPGEPSSDIEEPLSATAGRFEDGRIFALGTKATTMGLSNPLTAAGKTSSPPVL
TLPPILALRSPTANSLSPVVDDAMASPDAAAAALAALLCVSPTTAIDAAVHHGLPSRKVL
HAEMAAAKARMRLSVLLRGALQREHRSMATEVGDDNVVDVVEQLDSVDTESLSEEQRDPD
KATSADSVGRRSHQGQMKSGHGAPIAASISPLGKSGCAPRRALQSHEGAEPRRMATVPLP
TATTRQELFGNSTWRHK
Download sequence
Identical sequences psu|LbrM34_V2.0570 gi|154344457|ref|XP_001568170.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]