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Domain assignment for ISCW003305-PA from Ixodes scapularis

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ISCW003305-PA
Domain Number 1 Region: 124-399
Classification Level Classification E-value
Superfamily Pectin lyase-like 5.03e-22
Family Galacturonase 0.057
Further Details:      
 
Domain Number 2 Region: 375-525
Classification Level Classification E-value
Superfamily Pectin lyase-like 2.51e-20
Family Pectate lyase-like 0.086
Further Details:      
 
Domain Number 3 Region: 557-695
Classification Level Classification E-value
Superfamily Pectin lyase-like 2.55e-18
Family Pectate lyase-like 0.068
Further Details:      
 
Domain Number 4 Region: 14-97
Classification Level Classification E-value
Superfamily F-box domain 1.44e-17
Family F-box domain 0.002
Further Details:      
 
Weak hits

Sequence:  ISCW003305-PA
Domain Number - Region: 703-770
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0565
Family Growth factor receptor domain 0.02
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) ISCW003305-PA
Sequence length 796
Comment F-box containing protein, putative|DS676278:119957:145150:1|gene:ISCW003305
Sequence
MYEGGGGAHYLLYEVPDEVLLTIFSYLLEQDLCRAAQVCRRFHTISSDTELWKSLYQSVY
EYDLPLFHPAPCKFEFVAPEEADCSNPWKESFRQLYRGIHVRPHFQAQYDGHPQRYRGRS
LSYFDTIETAFNYCEELEQPVIFVHTGTYKGEFLIVDAGVALIGAAPGNVAEHVVLERDT
DSTITFVEGARGAYLGYMTLKFTPDITSSVPHHKHYCLEINENCSPTVDHCIIRSTSVVG
AAVCVSGAGAEPCLRSCDISDCENVGLYITDYAQGIYEENEISRNALAGVWVKNHANPIM
RRNHIHHGRDVGVFTFDNGLGYFEANDIHNNRIAGFEVKAGANPTVVRCEIHHGQTGGIY
VHENGRGQFIENKIHSNNFAGVWITSHSNPTIRRNDIYNGHQGGVYIFGEGRGLIEHNNI
HGNALAGIQIRTNSDPIVRYNKIHHGQHGGIYVHEKGQGLIEENEVYANTLAGVWITTGS
TPVLRRNRIHSGKQVGVYFYDNGHGRLEENDIFNHLYSGVQISGLPRTLNRLSPVSPGLA
ATPSSGATRSGEARTGASWVYNGGLGVLEQNEIFDNAMAGVWIKTDSNPTLRRNKIYDGR
DGGVCIFNGGKGVLEENDIFRNAQAGVLISTQSHPVLRRNRIFDGLAAGVEITNNATATL
EFNQIFNNRFGGLCLASGVQPILKGNRIFDNHNAVEKAVNSGQCLYKISSYTSFPMHDFY
RCKTCNTTDRNAICVNCIKTCHSGHDVEFIRHDRFFCDCGAGTLSNQCQLQGEPTQDTDT
LYDSAAPMESHTLLVN
Download sequence
Identical sequences B7PBI2
6945.ISCW003305-PA ISCW003305-PA XP_002408176.1.51680

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