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  Home > Genomes > Ixodes scapularis > ISCW017322-PA

Domain assignment for ISCW017322-PA from Ixodes scapularis

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ISCW017322-PA
Domain Number 1 Region: 2241-2449
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 7.13e-30
Family Laminin G-like module 0.0033
Further Details:      
 
Domain Number 2 Region: 948-1072
Classification Level Classification E-value
Superfamily Cadherin-like 5.28e-29
Family Cadherin 0.00073
Further Details:      
 
Domain Number 3 Region: 1696-1807
Classification Level Classification E-value
Superfamily Cadherin-like 1.83e-28
Family Cadherin 0.0011
Further Details:      
 
Domain Number 4 Region: 424-530
Classification Level Classification E-value
Superfamily Cadherin-like 3.71e-28
Family Cadherin 0.00047
Further Details:      
 
Domain Number 5 Region: 111-214
Classification Level Classification E-value
Superfamily Cadherin-like 3.8e-28
Family Cadherin 0.00065
Further Details:      
 
Domain Number 6 Region: 210-333
Classification Level Classification E-value
Superfamily Cadherin-like 5.89e-28
Family Cadherin 0.0019
Further Details:      
 
Domain Number 7 Region: 532-642
Classification Level Classification E-value
Superfamily Cadherin-like 1.05e-25
Family Cadherin 0.0024
Further Details:      
 
Domain Number 8 Region: 1382-1493
Classification Level Classification E-value
Superfamily Cadherin-like 1.71e-25
Family Cadherin 0.001
Further Details:      
 
Domain Number 9 Region: 636-739
Classification Level Classification E-value
Superfamily Cadherin-like 1.96e-24
Family Cadherin 0.0018
Further Details:      
 
Domain Number 10 Region: 1158-1291
Classification Level Classification E-value
Superfamily Cadherin-like 7e-24
Family Cadherin 0.0013
Further Details:      
 
Domain Number 11 Region: 1481-1579
Classification Level Classification E-value
Superfamily Cadherin-like 1.17e-23
Family Cadherin 0.0021
Further Details:      
 
Domain Number 12 Region: 1064-1170
Classification Level Classification E-value
Superfamily Cadherin-like 1.19e-22
Family Cadherin 0.0017
Further Details:      
 
Domain Number 13 Region: 1800-1905
Classification Level Classification E-value
Superfamily Cadherin-like 2.28e-22
Family Cadherin 0.001
Further Details:      
 
Domain Number 14 Region: 2461-2514,2542-2675
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 2.77e-22
Family Laminin G-like module 0.0059
Further Details:      
 
Domain Number 15 Region: 10-109
Classification Level Classification E-value
Superfamily Cadherin-like 3.4e-22
Family Cadherin 0.0033
Further Details:      
 
Domain Number 16 Region: 735-850
Classification Level Classification E-value
Superfamily Cadherin-like 7.85e-22
Family Cadherin 0.0018
Further Details:      
 
Domain Number 17 Region: 317-426
Classification Level Classification E-value
Superfamily Cadherin-like 9.14e-22
Family Cadherin 0.0017
Further Details:      
 
Domain Number 18 Region: 1276-1378
Classification Level Classification E-value
Superfamily Cadherin-like 7.42e-21
Family Cadherin 0.0034
Further Details:      
 
Domain Number 19 Region: 1589-1694
Classification Level Classification E-value
Superfamily Cadherin-like 3e-20
Family Cadherin 0.0013
Further Details:      
 
Domain Number 20 Region: 874-960
Classification Level Classification E-value
Superfamily Cadherin-like 0.0000000000385
Family Cadherin 0.0032
Further Details:      
 
Domain Number 21 Region: 2200-2243
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000373
Family EGF-type module 0.0074
Further Details:      
 
Domain Number 22 Region: 2157-2197
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000137
Family EGF-type module 0.023
Further Details:      
 
Domain Number 23 Region: 2098-2156
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000965
Family EGF-type module 0.0096
Further Details:      
 
Weak hits

Sequence:  ISCW017322-PA
Domain Number - Region: 1918-2003
Classification Level Classification E-value
Superfamily Cadherin-like 0.00154
Family Cadherin 0.02
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) ISCW017322-PA
Sequence length 3222
Comment protocadherin-16, putative|DS668046:1130794:1169644:1|gene:ISCW017322
Sequence 
MVTVTVLDRNDSPPRFQNGPYTISLSEDAPVGSTVAVLQADDPDLEGSVRFSIAEGQSDA
GHFRIDPQTGALLLVEALDRELQAQHLFSVTATDGLQSTEALVSIEVTDTNDNLPLFGEA
AYSFDLWEDTQRGAQVGAVSAVDADLGLNRQVSYSVLSDWANDVFSLNPQTGVFTLTSHL
DYELYQHYVLVVQAQDSGTPSLSSTATVYVNVLDLNDNAPLFDPMSYSDEVLENVTVGSS
LLRVSATDLDSGDNGRIVYSIAEGDPGGQLAILANGTIVTRLPLDRERKSLYSLVVRATD
QAPEVHKRLSSSVQVTIVLKDVNDMVPEFVTPNVTSVQENAPANTIVMAVKAVDRDEGRN
SYVEYSVSPEHTFSLGPVDGLLRVRGLLDREQRASYELLVTARDRGHPVRVASQRLRVRL
LDENDNSPVFDPRQYSAAVSENSSVGASVLRVSATDQDEGASGQVRYSIIAGDPNHDFSV
GQDTGVLRVRRSLDYERRTRYLLTLQAEDCAGASSELRFDTATVTISVTDVNDNAPAFLD
SPYELHVVENAATPVVLLTLAAHDADQLPSGPIHYRLEDLGHGAFRINGTSGELSLERPL
DRELRDRYLLTVLAVDSGNPRQTGTGTVSVFVSDVNDNAPEFDRSRYVASLAENQPADHP
VTRITATDADVGRNARIRYSLHGEQGSRFSVDAESGLVRARVPMDREECERYELRLVAHD
DGLTVRHSATVELVVLVTDQNDNRPTFASANTSVVVPSGAEPGHFVLGARATDADSGPNG
QLVFHLSGPDVDKFQIQQDTGVIRLAHRLASSSPRDDSSYEIQVHATDQGRVPLVSSMTV
FVSTADARQFPKFRSSTPGMLTLAEGGGNGVAPLATLSATSPKKGPAGRITYRVASGGNA
FALHPDSGVLTVIRGDALDLEATPRLQLWLEARDADEPALSSAVRIDVQLTDVNDNVPEF
ERDVYNTSVREEQSAGQLVAQLHARDGDSGVNGKLRYELRPLPTSRDFDDLPFEIDAATG
ELRTTARLDRETVAHYRFLVEARDEGDPSLTGTATVLVSVSDKNDNPPRFTRLFSVNVTE
NAPLGAFVIQVTSSDRDAAENANATYSFTENPGERFAIDPLTGNVTVAGPLDRELRDEYL
LKVAAVDGSWKAETPLTVSLQDVNDNAPRFERMAYRFRLPELQSGGSFVGRVAATDADKT
GPNAAVSYSLRRPSDLFRVDPATGEVLSKQPLRYRRSPRGATSPENQHVLRVLATDHGKP
PLSSETTVYVSVVDANNHVPKFEQTTYFSPLPDNAAVGLSVVRVTARDDQDVGVNAELMY
SIFDGNGTDLLDIHQTSGWLTVAKPLPRQQGQMFALKVRATDQGVPPKSADTVVSVTITG
ENQFSPVFTALSYQIIIPENEPVHSELLTVSATDADSGLNGEVRYSIESGNTGDSFAMEP
HNGALTISAVLDYETVPEFRLNVSACDAAFHRKCASATLTVIVTDVNDCPPQFNATHFDA
YVAENEPPGTTVTQLSASDADSGRNRIVQYALVGGSSDFAVDPQSGVVTAQSSFDYEQTS
EYVLEVVASNPGSLQYSSCQLRVHVTGKNEFFPRFVQPVFQFAVSESTVVGTAVGRVLAT
DEDSGPEGDVYFLFVGSSNDRGFRIQPSTGVITVSRTLDREAQARVVLSVMAKNGGSIRG
NDTDEAQVVVSIQDGNDPPVFLQPLYEARISEAAPVGSPVLSVSAVDRDVRPNNHQFFYS
ILEGDPNKVFGVDSQTGLLHTAAPLDRESVPSYTLTLAAIDRGSPPQTGTATVRVTLDDV
NDNGPEFEPADLLGYVLEDEPPYTSVLTLAARDRDLAPNGAPFAYSLVGGARRNLFELDR
QTGVLRTTQRLDREATPSLQLLVEVQDSGNPPIRARHGLTVLLVDKNDSPSSPRSLTVLV
WVYHSVFAGGKIADVRPLDPDATGEYQCRLESRESVFSIVSQCDLHASRLLSPSNYSFTV
RGNDGYHQDVTSTVNVQFRVFDNATVENSVSLRVVNQSAGDFLGSSYDRFLGLLRQVLEG
MGSPIVYSMADVKGQLQLTLAVRKSSGILVSPDKVSQRLEARRDTLQSSLAKTIVVGYEP
CASSPCRHGGTCSSRLDFQTSLSILDSAQLVFASPGATRSFACSCPVGFSGLQCQDQLDP
CSPSPCSEGSTCRIDAATTVGFQCLCPEDREGERCERPRRNSCASAPCKNGGSCREAPAG
SFFCLCRLGFKGSLCEQAADGCYHCLCEPNFFGRHCEKSTFGFEPYSYMAFPSLKPSTND
ISVVFATNRRHALLAYNFGAQNGGRSDFVALEIADGRPTFSFGGSRTAVAKVALDRDVAD
GNWHRVTVIRNGRVASLSVVSCQDHGELCEECSHANSSCSLSVTGQAGTLSLSSQPLYIG
GLPSVEPLLERPSQVWADDFVGCVHSVAVDGQPLALERPLRQQYVARTCGRRGDPCATGG
CRGANACRDLWSAAGCTCPGGMLVAQDCGQALEPYWLSGGSFLELVPQEKHRREALVQQR
RRQQQQQQPQPQRASRDLPPSKALSLRLRTLAQDGLLLHVATERDHTRLQLAEGHLEYLS
QSGQQEPVQWRHPARVSDGHWHQVVLSRTLETGGGAVSLTVDDQQRRVPTDASLHDFLDP
FLTSFTIGGRWEQNAVSAESLPGSLQGCVQQIAVNGELQSVNASQGYFRLVARGAVGRSC
SQEALRLDVAADPLGVGIILVIAFFVVLILVILVSLLVFRRCKLKRHKAPTPIKPNGNAL
INQITEATRGSVHTEPGYADGATPSAPEEHLRNPPSAQDLVPPKRAKERDIGSDNHLPRT
PQRPDIIEREVMHASSPLAASRCAEQSVYGAAAEPEHYDLENASSIAPSDIDIVYHYRVF
RDGSQLRKLHHNKGLHKHPGPHRHSPASPTARQSPRQQLLLRPAARDSPSALKMHHSTPL
ARLSPSSELSRQTPRILTLQDISGKPLQTALLASAHPGNGAKPFKDALTNSERSLNSPVS
QLSRSTGSLPSAKLKQACAAPAAESRHAQPLAGLGLTAEEIECLNARPRNCSLVSTLDAV
SSSGSEGTKGKLSQLLDDRPAALLDAATGHDSSSDESGNDSFTCSEFEYDNGYEKAHRDF
APGNMIFSKLAEEDNENDEDSSKTYDGFDSFRGSLSTLVASDDDLSHLSYKPPSGAVLGW
DCLLNWGPNFENLVGVFKDIADLPDTVSPLTPGHPKPSEEYV
Download sequence
Identical sequences B7P9Y8
XP_002405854.1.51680 ISCW017322-PA 6945.ISCW017322-PA

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.