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  Home > Genomes > Ixodes scapularis > ISCW020313-PA

Domain assignment for ISCW020313-PA from Ixodes scapularis

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ISCW020313-PA
Domain Number 1 Region: 124-263
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000000000102
Family Growth factor receptor domain 0.014
Further Details:      
 
Domain Number 2 Region: 314-364
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000759
Family EGF-type module 0.0077
Further Details:      
 
Domain Number 3 Region: 1535-1568
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000839
Family EGF-type module 0.014
Further Details:      
 
Domain Number 4 Region: 71-106
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000044
Family EGF-type module 0.027
Further Details:      
 
Domain Number 5 Region: 30-65
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000053
Family EGF-type module 0.026
Further Details:      
 
Domain Number 6 Region: 361-446
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000118
Family Growth factor receptor domain 0.022
Further Details:      
 
Weak hits

Sequence:  ISCW020313-PA
Domain Number - Region: 1283-1334
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00144
Family EGF-type module 0.034
Further Details:      
 
Domain Number - Region: 1071-1105
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00237
Family EGF-type module 0.028
Further Details:      
 
Domain Number - Region: 727-758
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00559
Family EGF-type module 0.041
Further Details:      
 
Domain Number - Region: 589-619
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00939
Family EGF-type module 0.035
Further Details:      
 
Domain Number - Region: 1001-1033
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0109
Family Merozoite surface protein 1 (MSP-1) 0.04
Further Details:      
 
Domain Number - Region: 932-964
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0156
Family EGF-type module 0.058
Further Details:      
 
Domain Number - Region: 658-690
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0156
Family EGF-type module 0.035
Further Details:      
 
Domain Number - Region: 1142-1173
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0178
Family EGF-type module 0.044
Further Details:      
 
Domain Number - Region: 517-549
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0201
Family EGF-type module 0.049
Further Details:      
 
Domain Number - Region: 865-897
Classification Level Classification E-value
Superfamily EGF/Laminin 0.026
Family Follistatin (FS) module N-terminal domain, FS-N 0.063
Further Details:      
 
Domain Number - Region: 274-307
Classification Level Classification E-value
Superfamily EGF/Laminin 0.028
Family EGF-type module 0.039
Further Details:      
 
Domain Number - Region: 453-486
Classification Level Classification E-value
Superfamily EGF/Laminin 0.054
Family EGF-type module 0.029
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) ISCW020313-PA
Sequence length 1631
Comment conserved hypothetical protein|DS813296:220418:265057:1|gene:ISCW020313
Sequence 
MSASANRASRGTPLSPATWLVSNATFSSPDVDECQDPHACGVNAECQNTPGSYSCFCPAG
YTGDPTAECHDLDECSRPTACGLNALCLNDVGSYHCGCKEGYSGDPRIQCLDIVGVECTT
HHDCTANAECINNFCHGPSGLCGQGAICSNTPGSYRCSCPPGFTGDPFRFCEDVNECERL
LGPSGLCGQGALCANTLGSFSCSCPPGYSGNGRVRCHDINECAQTFGPNGKCGISAVCTN
TPGSYHCRCPTGTSGDPTVRCKSRSAPFLFLACADPCEDIFCGAQAKCQLDHTGQPICVC
SHGFTGQSNSLPGCVDIDECSANQPCGHGALCRNLPGKFECVCPHGFEGDPYRGCLAKDI
NECEEISEWSPCGANSECRDLKGAYQCLCAPGYTGNPRQGCSPIHVNECTSNLPIDPNGP
CGVGAICINVVGGFQCECPPATTGDPFTTGSQEQAHCSASSCGTNAQCLGTGDRLDCRCP
AGLQGNPFTHCNDDCAVDEDCLEHESCRHQSGGNKCVDVCLRHTCGPNARCLGQRHLPTC
VCRDSFLGNPNDRVRGCQPLLDECFHDADCPESDRCLPNARGVKNCTRTCSKTRCGPNAH
CVGRVHKPICECREGYNGNPGDFTRGCTPIPLDRCHSNIDCKGYEVCKLTQVGIKDCIEL
CLNYECGPNANCIAMDHLAACECLPGFAGNPHDLRRGCMRHLCEHDNDCPDSAVCLLTRN
GVKNCTDPCWDRRCGPNADCITTNHRASCECRIGFEGIPDDIREGCTPIPKCRSNSDCRD
DEVCGVDHNGIRSCLVGCTTTLCGQNTICRTENHISECRCRESFVGDPYNRATGCQIQPE
RCHRDNDCPSIAVCKRSFDGKNDCHDACEGHNCAQGAVCQAVNHRPTCSCKPGLVGDPLI
RGCHIPDECQVDVDCREDLICRPDTTGLRKCVPVCVYEKCAPNAFCVGIHHKAQCSCPPS
TQGDPYNPHIACFPTQPVAEGCTSDDECASHEICVQGGKCVDACEKKQCGPNAVCRAFNH
RASCHCLQDFKGDPDNPINGCRPKDECQVDDDCKRITDVCRTDNTGSKRCFDACQFNKCG
PNSNCVPRQHAYECQCRHGFIRDRENVLGCVERERDECSNHTGCPTTSACIPNTIGVMKC
AEVCISFSCTPDANCVAFNHRGRCSCREGYTGDPNSRDGCRKVPEPECINHSDCPHPNEV
CQFDEAYGERRCQDGCKFLKCAPRAVCVVDNHLPKCSCPNGLYIGDPYDQREGCKQVECL
KDEDCHITKACFPNFYCEDPCVDGCGINAACVAQNHQRICHCRPGYTGDALVRCEEIHYC
DSNPCHASARCIDVPSGYELGQPMCQNPCDHFKCGTNTVCRAEGHAATCECQPHFRGDPA
QGCSRESVVCLSDHDCSSGYACVDEQCRLVCTRESDCASGEKCINSRCVHPCYSHTDCPP
KEACLSAGYCQVGCRKNTDCQLEETCSQNRCQNPCEIKGLCGPNAICKVSNHEANCFCPD
TLTGNPTPIIGCKRPVVTCTGSCPKGLSCIENRYVDECVNNPCHSTGICENTVGSFLCRC
PEGFIGDGFSGCTNPGECPRGDVDCPLNAACDQNGVTKCISPCDRVQCGPHGTCTVKNRQ
APVRGSYYLRH
Download sequence
Identical sequences B7PXC1
XP_002400170.1.51680 6945.ISCW020313-PA ISCW020313-PA

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.