SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSDORP00000001918 from Dipodomys ordii 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSDORP00000001918
Domain Number 1 Region: 27-204
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.4e-42
Family Pentraxin (pentaxin) 0.00072
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSDORP00000001918   Gene: ENSDORG00000002048   Transcript: ENSDORT00000002048
Sequence length 216
Comment pep:known_by_projection scaffold:dipOrd1:scaffold_48191:1909:5443:-1 gene:ENSDORG00000002048 transcript:ENSDORT00000002048 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
NSAFKSPDAFKVSLPLRTNYLYGKIKKTLPELYAFTICLWLRSSASPGIGTPFSYAVPGQ
ANEIVLIEWGNNPIELLINDKVAQLPLFVSDGKWHHICVTWTTRDGLWEAFQDGEKLGTG
ENLAPWHPIKPGGVLILGQEQDTVGGRFDATQAFVGELSQFNIWDRVLRAQEIINIANCS
TNMPGNVIPWVDNNVHVFGGASKWPVETCEERLLDL
Download sequence
Identical sequences ENSDORP00000001918 ENSDORP00000001918

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]